Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  124 bits (310), Expect = 4e-33
 Identities = 89/267 (33%), Positives = 132/267 (49%), Gaps = 28/267 (10%)

Query: 64  WIAENLATDRRTLAMSK-----------KADHILGTTRMGRDVWSQVAYGARVSLAVGFG 112
           W+A +   D  TL +S             +  +LGT   GRD+ S + YGAR+SLAVG  
Sbjct: 42  WVAPHNPFDLATLELSNARLPPAWHPDGSSSFLLGTDDQGRDILSALMYGARISLAVGLA 101

Query: 113 AGITVCFLATVIGVSAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEA------- 165
           + +    +    G+ AG+ GG +D FL    ++ML  P   L+ +L A +G A       
Sbjct: 102 SVLLSVVIGVTFGLLAGFLGGWVDGFLMRLCDVMLSFPPI-LIALLIAGVGRALFPNAHE 160

Query: 166 ----GPLTIALIIGCTSWAWGARVVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNL 221
               G L I++ +  T W   AR VR  T+  R KE+V+AA V G +  RI+   +LPN+
Sbjct: 161 TLAFGVLIISITL--TGWVQYARTVRGSTLVERNKEYVQAARVTGVAPLRIMRRHVLPNV 218

Query: 222 ISIVGASFIGSVMYAIMMEATISFLGLGDPNTI-SWGIMLYNVQTSSSMLIGAWWELLAP 280
           +  V       V  AI+ EAT+SFLG+G P T  S G ++     +  +  G WW  + P
Sbjct: 219 MGPVLVLATIQVATAIITEATLSFLGVGAPPTSPSLGTLIR--VGNDYLFSGEWWITIFP 276

Query: 281 CLSLTLLVTGLALLNFAVDEIANPQLR 307
              L L+   + LL   + +  NP+LR
Sbjct: 277 GAMLVLIALSVNLLGDWLRDALNPRLR 303