Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  143 bits (360), Expect = 6e-39
 Identities = 97/293 (33%), Positives = 156/293 (53%), Gaps = 28/293 (9%)

Query: 10  GNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDGWIAENL 69
           G+    +G+ ILG   LLA+ APL++ H+P         Y   V +  +  P  W     
Sbjct: 36  GHHGMTLGLVILGAMVLLALLAPLISPHDP---------YAQDVSR--RLIPPVW----- 79

Query: 70  ATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVIGVSAG 129
             D+ + A      H+LGT ++GRD  S++ +GARVSLA+G  + +    +   +GV AG
Sbjct: 80  -HDKGSWA------HLLGTDKLGRDYLSRLLFGARVSLAIGLVSVMLAGTIGIALGVLAG 132

Query: 130 YFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWGARVVRSQ 189
           YFGG++D  ++  + + L +P   +   LA+ +G +  + I +++G   W     V RS 
Sbjct: 133 YFGGRVDAVVSYLLTVRLALPVILVALALASLVGGSVKVVI-MLLGLLLWDRFLIVSRSV 191

Query: 190 TMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISFLGLG 249
           T  LRE EF+ AA+ LG SS  I+  EILPNL+  +       + +A+++EAT+SFLGLG
Sbjct: 192 TRQLREAEFIAAAQTLGASSLFIMLREILPNLLGPLTVVATLEIAHAVLLEATLSFLGLG 251

Query: 250 -DPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEI 301
             P   SWG+M   V    + +    W ++ P + L LLV  + L+   + ++
Sbjct: 252 VQPPMPSWGLM---VAEGKAYMFFQPWVIVIPGVVLALLVLSINLVGDGLRDV 301