Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  127 bits (318), Expect = 5e-34
 Identities = 86/305 (28%), Positives = 140/305 (45%), Gaps = 34/305 (11%)

Query: 4   LWKLLRGNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDG 63
           LW   R N +AM+G+ I+    LL++AAP LT ++P  +                     
Sbjct: 29  LWLGFRTNPLAMLGLFIIAAVLLLSLAAPWLTPYDPGFQN-------------------- 68

Query: 64  WIAENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATV 123
            ++  LA        +  A H LGT  +GRDV+S++ YG R +L +          L  +
Sbjct: 69  -LSNRLA--------APSAGHWLGTDELGRDVFSRIVYGGRTTLGMVIAVVALTAPLGLL 119

Query: 124 IGVSAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWGA 183
           +G  AGY GG +D  L    +I L  P+  L     A + + G  +  L I  T+W   A
Sbjct: 120 VGCIAGYAGGLLDKILMRLTDIFLAFPRLVLALAFVAAL-KPGVESAILAIALTAWPPYA 178

Query: 184 RVVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATI 243
           R+ R++T+  R  +F+ A  + G +  RII   I+P  +  +       +   I+  A++
Sbjct: 179 RLARAETLQFRHTDFIAACRLTGAAPLRIILRHIMPLCVPSLIVRVTLDMSSIIITAASL 238

Query: 244 SFLGLG-DPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIA 302
            FLG+G  P +  WG M   + T+   L  AWW  L PC+++ L       L   + ++ 
Sbjct: 239 GFLGMGAQPPSPEWGTM---IATARRFLFNAWWVPLVPCIAIFLTSLAFNFLGDGLRDLL 295

Query: 303 NPQLR 307
           +P+ R
Sbjct: 296 DPKER 300