Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  143 bits (361), Expect = 5e-39
 Identities = 96/289 (33%), Positives = 152/289 (52%), Gaps = 37/289 (12%)

Query: 8   LRGNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDGWIAE 67
           LR NR A + + +L +F   +V A L           +P +  A  ++A    PDG    
Sbjct: 12  LRRNRPAQLALAVLMVFGATSVLAWL-----------SPWDPNAMAIQARMLPPDG---- 56

Query: 68  NLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVIGVS 127
                           H  GT   GRD +++  YG ++SL VG  A +    + T++G  
Sbjct: 57  ---------------AHWFGTDEYGRDYFTRALYGGQISLMVGVLAMVFSTLIGTLVGTV 101

Query: 128 AGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWGARVVR 187
           +GY GG++D  L  A+++++ IP + LL VL A++ + G   I LII   +W   +R+VR
Sbjct: 102 SGYIGGRLDTVLMRAVDMLMSIPAFFLLLVLNAYL-KPGVANIILIISALTWMSLSRLVR 160

Query: 188 SQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISFLG 247
           ++T++L+E+E+V  A   GE +WRII   I+PN++  +  +   ++  AI+ME+T+SFLG
Sbjct: 161 AETLSLKEREYVLYARASGERAWRIILRHIIPNILPTIMVAATLNIASAILMESTLSFLG 220

Query: 248 LG--DPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALL 294
           LG   PN  SWG ML N Q   + +  A W  L P + + L V    +L
Sbjct: 221 LGVQQPNA-SWGSMLNNAQ---AYIGDATWLALFPGVLILLTVLSFNVL 265