Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  124 bits (312), Expect = 2e-33
 Identities = 87/302 (28%), Positives = 141/302 (46%), Gaps = 38/302 (12%)

Query: 7   LLRGNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDGWIA 66
           LL  N +  IG  I+ +  L+AV +P + +H+P                           
Sbjct: 33  LLMRNPLTAIGAAIVLVLMLMAVFSPWIATHDP--------------------------- 65

Query: 67  ENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVIGV 126
             LA D      +  A H  GT   GRDV+S++ YG+R++L +     ITV  +  ++GV
Sbjct: 66  --LAQDLANTLQAPSASHWFGTDEFGRDVFSRLVYGSRITLYIVALVSITVGPIGLLLGV 123

Query: 127 SAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWG--AR 184
            AGY+GG +D   T  M I  +   +P L +  AF+   GP    ++I  T  AW   AR
Sbjct: 124 VAGYYGGVVD---TILMRITDIFISFPSLVLALAFVAALGPGLEHVVIAITLTAWPPIAR 180

Query: 185 VVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATIS 244
           + R++T++LR+ +FV A ++ G SS RI+   I+P  +  V      ++   I+  A + 
Sbjct: 181 LARAETLSLRQADFVSAVKLQGASSLRILLHHIVPLCLPSVIIRITMNMAGIILTAAGLG 240

Query: 245 FLGLG-DPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIAN 303
           FLGLG  P    WG M   +      ++  WW +  P L++ +       L   + +I +
Sbjct: 241 FLGLGAQPPDPEWGAM---ISAGRRYMMECWWLVTIPGLAILINSLAFNFLGDGLRDILD 297

Query: 304 PQ 305
           P+
Sbjct: 298 PR 299