Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  139 bits (350), Expect = 9e-38
 Identities = 90/293 (30%), Positives = 152/293 (51%), Gaps = 28/293 (9%)

Query: 10  GNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDGWIAENL 69
           G+    +G+ ILG   LLAV AP ++ H+P  +     E    ++     +   W     
Sbjct: 36  GHHGMTLGLVILGTIILLAVLAPFISPHDPYAQ-----EVSRRLIPPVWHDKGSW----- 85

Query: 70  ATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVIGVSAG 129
                        +H+LGT ++GRD +S++ +GARVSL +G  + +    +   +GV AG
Sbjct: 86  -------------EHLLGTDKLGRDYFSRLLFGARVSLTIGLVSVMLAGTIGISLGVLAG 132

Query: 130 YFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWGARVVRSQ 189
           YFGG++D  ++  + + L +P   +   LA+ +G +  + I +++G   W     V R+ 
Sbjct: 133 YFGGRVDAAVSYLLTVRLSMPVILVALALASLVGGSVKVVI-MLLGLLLWDRFLIVSRTV 191

Query: 190 TMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISFLGLG 249
           T  LRE EF+ AA+ LG SS  I+  EILPNL+  +       + +A+++EAT+SFLGLG
Sbjct: 192 TRQLREAEFIAAAQTLGASSLFIMLREILPNLLGPLTVVATLEIAHAVLLEATLSFLGLG 251

Query: 250 -DPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEI 301
             P   SWG+M   V    + +    W ++ P + L L+V  + L+   + ++
Sbjct: 252 VQPPMPSWGLM---VAEGKAYMFFQPWVIVIPGVVLALMVLSINLVGDGLRDV 301