Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  131 bits (330), Expect = 3e-35
 Identities = 89/228 (39%), Positives = 129/228 (56%), Gaps = 10/228 (4%)

Query: 84  HILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCF-LATVIGVSAGYFGGKIDDFLTAA 142
           H+LGT R+GRD+ S++A GA++SL VG   GI V F +   +G  AGYFGG ID  +   
Sbjct: 171 HLLGTDRLGRDMLSRLAIGAQLSLTVGL-LGIAVSFAIGITLGGMAGYFGGWIDAGVQRL 229

Query: 143 MNIMLVIPQYPLLFVLAAFI-GEAGPLT----IALIIGCTSWAWGARVVRSQTMALREKE 197
             I+  +P+ PL   L+A +  +  P+T    I++I+G   W   AR VRS+ +ALRE++
Sbjct: 230 SEILKSLPELPLWLALSAAVPAQWSPVTVFLCISVILGLLDWPSLARAVRSRFLALREED 289

Query: 198 FVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISFLGLG-DPNTISW 256
           FV AAE++G S  RII   +LPN  S + AS   S+   I+ E  +SFLGLG  P   SW
Sbjct: 290 FVMAAELMGASPARIIRRHLLPNFASHLLASATLSIPAMILGETALSFLGLGLRPPATSW 349

Query: 257 GIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIANP 304
           G+ML + Q   ++    W  L  P L + L+V         + +  +P
Sbjct: 350 GVMLNDAQNLMAVETYPWVSL--PMLPVILVVLSFNFFGDGLRDALDP 395