Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., Dipeptide transport system permease protein DppC from Azospirillum sp. SherDot2

 Score =  154 bits (390), Expect = 2e-42
 Identities = 98/307 (31%), Positives = 155/307 (50%), Gaps = 33/307 (10%)

Query: 5   WKLLRGNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDGW 64
           W+    N+ A++G+ IL    +LA  A +    +P +    P + P              
Sbjct: 7   WRAFARNKGAVLGLAILIAIVVLAAFASVFFPGDPWEMATAPFQPPL------------- 53

Query: 65  IAENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVI 124
                             D +LG+  +GRD+ S +A+GARVSL +G  +      +   +
Sbjct: 54  ----------------SEDALLGSDMLGRDIASGIAHGARVSLLIGLTSTAAALAIGVTL 97

Query: 125 GVSAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWGAR 184
           G  AG+ GGK+DD +     +   IP + L  VL A I      TI L I   SW   AR
Sbjct: 98  GALAGFHGGKVDDAIMRFTELFQTIPNFVLAVVLVA-IFTPSLTTIVLAIAIVSWPPLAR 156

Query: 185 VVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATIS 244
           + R++ ++LR +EFV+AA   G+S+  II  +ILPN +S +  S    V  AI++E+++S
Sbjct: 157 LARAEFLSLRSREFVQAAITTGQSNSTIILRQILPNSLSPIIVSASLMVATAILLESSLS 216

Query: 245 FLGLGDPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIANP 304
           FLGLGDPN +SWG   Y +  + +++  AWW  + P L++ L V  L L+   +++  NP
Sbjct: 217 FLGLGDPNAMSWG---YMIGAARTVIRQAWWMSVFPGLAIVLTVLALNLVGEGLNDALNP 273

Query: 305 QLRSHKG 311
           +L   +G
Sbjct: 274 KLARSRG 280