Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  112 bits (281), Expect = 9e-30
 Identities = 81/292 (27%), Positives = 137/292 (46%), Gaps = 38/292 (13%)

Query: 17  GVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDGWIAENLATDRRTL 76
           G+ +L L  + A+ AP L +H+P         Y   +    +A  +G             
Sbjct: 34  GLAVLLLLVIAAIFAPWLATHDP---------YAQDLANTLQAPGNG------------- 71

Query: 77  AMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVIGVSAGYFGGKID 136
                  H+ GT  +GRD++S++ +GAR++L +     I V  +  ++G ++GY GGK D
Sbjct: 72  -------HVFGTDELGRDIYSRLLWGARITLTIISLVSIIVGPVGLLVGTASGYLGGKFD 124

Query: 137 DFLTAAMNIMLVIPQYPLLFVLAAFIGEAGP-LTIALI-IGCTSWAWGARVVRSQTMALR 194
              T  M I  +   +P L +  AF+   GP L  A+I I  TSW   AR+ R++ M  R
Sbjct: 125 ---TVMMRITDIFLSFPSLILSLAFVAALGPSLNNAIIAIALTSWPPIARLARAEAMTFR 181

Query: 195 EKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISFLGLG-DPNT 253
           + +++ AA + G S  RII   I+P  +  V      ++   I+  A + FLGLG  P  
Sbjct: 182 KADYIAAARLQGASPLRIIVKSIMPMCLPSVLIRLTLNMATVILTAAGLGFLGLGAQPPL 241

Query: 254 ISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIANPQ 305
             WG M   + T    ++ +WW +  P +++  +     LL   + +  +P+
Sbjct: 242 PEWGAM---IATGRRYMLDSWWLVTFPGVAILSVSLAFNLLGDGLRDALDPK 290