Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  233 bits (593), Expect = 7e-66
 Identities = 125/326 (38%), Positives = 193/326 (59%), Gaps = 13/326 (3%)

Query: 3   TPLISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRL--HK 60
           TP +++ NL   + T+ G VR+  +VSF + PG+   L GESG GKS  + +LMRL    
Sbjct: 8   TPRLAVSNLSTSFPTEDGLVRSVADVSFSIQPGKTTALVGESGSGKSVTSLTLMRLLPKT 67

Query: 61  PPAFITGGEVIFNGE----DILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCD 116
             A ++G       E    D+L+  +  M++ R  ++SM+FQ  M +LNPV T+ EQ  +
Sbjct: 68  ANAQVSGSASFVTREGKTLDLLRIGEREMRSLRGNQLSMIFQEPMTSLNPVFTIGEQIAE 127

Query: 117 VITRHTNMTREQAKRRAEGLLEIVDIHPS--RLNDYPHQFSGGMRQRLVIAIALALNPKM 174
            +  H  + R+ A   A  +LE+V+I  +  R+++YPHQ SGGMRQR++IA+A+A +P +
Sbjct: 128 SVRLHKGLDRKAAMAHARRMLELVEIPAAAQRIDEYPHQLSGGMRQRVMIALAMACDPTL 187

Query: 175 IIMDEPTTALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIE 234
           +I DEPTTALDV +Q +IL+ +  L+ E G SILFITH+L ++   +D + ++Y+G ++E
Sbjct: 188 LIADEPTTALDVTIQAQILELMRRLQAETGMSILFITHNLGVVAHHADDVVVLYAGRVVE 247

Query: 235 VAPSKQILETPYHPYTKGLGSSFP-----PLTGPKTKLTGIPGNPLNLLDIPQGCRFQAR 289
            AP + +   P HPYT+GL +  P     P      +L  I G   + L  P GC F+ R
Sbjct: 248 SAPVRPLFVQPEHPYTQGLLACLPGKARLPSQPKPKRLFAIRGQVSSPLAPPPGCAFEPR 307

Query: 290 CDRVHEACTKVPTVLRQIEHGRFSNC 315
           CD+    C+     L + +HGR + C
Sbjct: 308 CDQALAECSAAMPPLIETQHGREARC 333