Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., Oligopeptide ABC transporter, ATP-binding protein OppD (TC 3.A.1.5.1) from Variovorax sp. SCN45

 Score =  244 bits (623), Expect = 2e-69
 Identities = 127/306 (41%), Positives = 183/306 (59%), Gaps = 3/306 (0%)

Query: 4   PLISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHKPPA 63
           PL+ + NL   + T AG VR+ + VS+ +  G   G+ GESGCGKS  A S++RL   P 
Sbjct: 15  PLLEVDNLRTHFHTLAGVVRSVDGVSYTVRAGRTLGVVGESGCGKSVTALSILRLVPTPP 74

Query: 64  FITGGEVIFNGEDILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITRHTN 123
               G V   G D+++ S+  M+  R   +SM+FQ  M +LNPVLT+  Q  + +  H  
Sbjct: 75  GRHMGAVRLRGTDLMQLSEREMRQIRGNRISMIFQEPMTSLNPVLTVGRQIAETVQLHQK 134

Query: 124 MTREQAKRRAEGLLEIVDIHPS--RLNDYPHQFSGGMRQRLVIAIALALNPKMIIMDEPT 181
            +R  A +RA  +L +V I     R+N+YPHQ SGGMRQR++IA+ALA NP+++I DEPT
Sbjct: 135 ASRADALKRAVEMLRVVQIPEPERRVNEYPHQLSGGMRQRVMIALALACNPEVLIADEPT 194

Query: 182 TALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAPSKQI 241
           TALDV +Q +IL  I  L++E G  ++ ITHDL ++ E  DR+ +MY+G  +E A    +
Sbjct: 195 TALDVTIQAQILDLIKRLQKELGMGVVMITHDLGVVAESCDRVVVMYAGRKVEEADVIDL 254

Query: 242 LETPYHPYTKGLGSSFPPLTGPKTKLTGIPGNPLNLLDIPQGCRFQARCDRVHEAC-TKV 300
            + P HPYT+ L +S P +    T+LT IPG      ++ +GC F ARC      C  + 
Sbjct: 255 FDRPLHPYTRALMASMPAMNTASTRLTEIPGLVPAAHELGRGCAFAARCSHARARCRAEA 314

Query: 301 PTVLRQ 306
           P + RQ
Sbjct: 315 PQLTRQ 320