Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  241 bits (615), Expect = 2e-68
 Identities = 116/295 (39%), Positives = 184/295 (62%), Gaps = 2/295 (0%)

Query: 5   LISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHKPPAF 64
           L+ +++L V++    G +RA + +SFD+APGE+ G+ GESG GKS    +++ L + P  
Sbjct: 3   LLQVKDLVVEFPHRRGTLRALDRISFDIAPGEILGVVGESGAGKSLTGAAIIGLLESPGR 62

Query: 65  ITGGEVIFNGEDILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITRHTNM 124
           + GGE+   G+ I     + M+  R +++  +FQ  + +LNP+ T+  Q  + I  H  +
Sbjct: 63  VAGGEIRLEGQRIDNLGFDAMRPIRGRKIGAIFQDPLTSLNPLYTVGRQLVETIRAHLPV 122

Query: 125 TREQAKRRAEGLLEIVDIHPS--RLNDYPHQFSGGMRQRLVIAIALALNPKMIIMDEPTT 182
           T  +A++RA GLL+   I  +  R++ +PHQFSGGMRQR+VIA+ALA  PK+I+ DEPTT
Sbjct: 123 TDAEARKRAIGLLQDTGIPAAEQRIDHFPHQFSGGMRQRVVIALALAAEPKLIVADEPTT 182

Query: 183 ALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAPSKQIL 242
           ALDV +Q +I+Q +  + +E G +++ ITHD+ ++ E  DR+ +MY+G + E+ P  +++
Sbjct: 183 ALDVSIQAQIIQLLKRICKERGAAVMLITHDMGVIAETCDRVAVMYAGRIAEIGPVHEVI 242

Query: 243 ETPYHPYTKGLGSSFPPLTGPKTKLTGIPGNPLNLLDIPQGCRFQARCDRVHEAC 297
             P HPYT GL +S P +T  + +L  I G    L  IP GC +  RC R    C
Sbjct: 243 HQPAHPYTSGLMASIPDMTSDRERLNQIDGAMPRLNAIPTGCAYNPRCPRTFARC 297