Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  235 bits (600), Expect = 2e-66
 Identities = 123/300 (41%), Positives = 175/300 (58%), Gaps = 4/300 (1%)

Query: 1   MTTPLISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHK 60
           +  P + +RNL   + T AG +   + VSF L  G+V GL GESG GKS   FS+M L  
Sbjct: 9   LEVPTLEVRNLQTRFHTRAGVLPVVDGVSFTLGRGKVLGLVGESGSGKSVTGFSIMGLVD 68

Query: 61  PPAFITGGEVIFNGEDILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITR 120
           PP  + GG+V+F G ++ +      +  R   ++M+FQ  M  LNPVL ++ Q  + +  
Sbjct: 69  PPGKVEGGQVLFQGRELTQLPAIERRELRGNRIAMIFQDPMATLNPVLRVDTQMIEAVKA 128

Query: 121 HTNMTREQAKRRAEGLLEIVDIHPS---RLNDYPHQFSGGMRQRLVIAIALALNPKMIIM 177
           H  ++ E+A+R A   L ++ I PS   RL  YPHQ SGGMRQR+ IAIA+   P +II 
Sbjct: 129 HKRVSTEEARRHARDTLGLMGI-PSPEERLRAYPHQLSGGMRQRVAIAIAMLHGPDLIIA 187

Query: 178 DEPTTALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAP 237
           DEPTTALDV +Q +IL ++  L  E G S+++I+HDLS++   +D I +MY+G ++E   
Sbjct: 188 DEPTTALDVTIQAQILSEVQKLVRETGTSLIWISHDLSVVASLADEIAVMYAGRIVEHGT 247

Query: 238 SKQILETPYHPYTKGLGSSFPPLTGPKTKLTGIPGNPLNLLDIPQGCRFQARCDRVHEAC 297
              +L+ P HPYT+GL  S P       +L  I G   +LL +P GC F  RC     AC
Sbjct: 248 VADVLDHPQHPYTRGLIDSLPSANERGARLRQIQGMTPSLLKMPAGCAFAPRCPHADAAC 307



 Score =  178 bits (452), Expect = 3e-49
 Identities = 113/304 (37%), Positives = 154/304 (50%), Gaps = 12/304 (3%)

Query: 16  ITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHKPPAFITGGEVIFNGE 75
           +T A DV     V   + PGEV GL GESGCGKST+      L  P    T GEVI  G+
Sbjct: 393 VTHAVDV-----VDLSVRPGEVVGLVGESGCGKSTLGRIAAGLLTP----TEGEVIVGGK 443

Query: 76  DILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITRHTNMTREQAKRRAEG 135
            +   S +   A R + + MVFQ    +LNP L +     +    H              
Sbjct: 444 PVASLSAQEQLAARLR-IQMVFQDPYASLNPRLRVSRIVGEAAMLHGLTDAAGQDDYVCA 502

Query: 136 LLEIVDIHPSRLNDYPHQFSGGMRQRLVIAIALALNPKMIIMDEPTTALDVVVQREILQK 195
            LE   + P+  + YPHQFSGG RQR+ IA ALA+ P M++ DE   ALDV +Q +IL  
Sbjct: 503 QLERAGLDPALRHRYPHQFSGGQRQRIGIARALAVQPSMLVCDEAVAALDVSIQAQILNL 562

Query: 196 IYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAPSKQILETPYHPYTKGLGS 255
              L+++ G + LFI+HDL ++    DR+ +MY G ++E AP   +   P HPYT+ L +
Sbjct: 563 FMDLRDQLGLAYLFISHDLGVIEHLCDRVVVMYLGRVVESAPVADLFARPAHPYTQALLA 622

Query: 256 SFPPLTGPKTKLTGIPGNPLNLLDIPQGCRFQARCDRVHEAC-TKVPTVLRQIEHGRFSN 314
             P +    T  + I G   + +  P GC F  RC +    C T+VP  LR I     + 
Sbjct: 623 EIPSIDARGTTFSAIRGEIPSPIAPPSGCHFHPRCPQAMPRCRTEVPR-LRGIAIRHATA 681

Query: 315 CHLY 318
           CHLY
Sbjct: 682 CHLY 685