Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

 Score =  244 bits (623), Expect = 2e-69
 Identities = 123/314 (39%), Positives = 192/314 (61%), Gaps = 6/314 (1%)

Query: 5   LISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHKPPAF 64
           ++ I+ L  + +TD G++   ++++  LA GEV GL GESG GKS    S+M L   P  
Sbjct: 4   MLEIKGLKTEVVTDEGNITLIDDITLSLAAGEVMGLVGESGSGKSVTGLSIMGLLDKPVQ 63

Query: 65  ITGGEVIFNGEDILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITRHTNM 124
           +TGG+++F G D+   S + +++ R   ++M+FQ  M+ LNPVL ++ Q  +V+  H N+
Sbjct: 64  MTGGKILFKGRDLRSASQKELRSIRGNRIAMIFQDPMSTLNPVLRIDTQMMEVVHAHENV 123

Query: 125 TREQAKRRAEGLLEIVDIHPS---RLNDYPHQFSGGMRQRLVIAIALALNPKMIIMDEPT 181
           +++ A+ RA   L +V I PS   RL+ YPHQFSGGMRQR+ IAIAL ++P +II DEPT
Sbjct: 124 SKQVARERARDALGMVGI-PSPEERLSAYPHQFSGGMRQRVAIAIALLMSPDVIIADEPT 182

Query: 182 TALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAPSKQI 241
           TALDV +Q +IL  +  L  E G +++++THDLS++   ++++ +MY+G ++E   +  +
Sbjct: 183 TALDVTIQAQILSIVQKLAREKGTALIWVTHDLSVVAGLAEKLSVMYAGRIVEQGLTADL 242

Query: 242 LETPYHPYTKGLGSSFPPLTGPKTKLTGIPGNPLNLLDIPQGCRFQARCDRVHEACTKVP 301
           L  P HPYT GL +S P       +L  I G   ++ ++P+GC F  RC    E C   P
Sbjct: 243 LRRPLHPYTNGLIASLPAHNKRGERLRQISGTTPSVANMPKGCAFHPRCSFATEICLNSP 302

Query: 302 TVLRQIEHGRFSNC 315
            +  +   GR   C
Sbjct: 303 AL--EPTEGRLLRC 314