Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  233 bits (593), Expect = 6e-66
 Identities = 123/313 (39%), Positives = 185/313 (59%), Gaps = 4/313 (1%)

Query: 1   MTTPLISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHK 60
           M   +I +RNL V++    G V A +++S  + PGE+ G+ GESG GKS    ++  L +
Sbjct: 1   MNQSVIDVRNLKVEFPGRRGTVTALSDISLSIRPGEILGVVGESGAGKSMTGLAIQGLLE 60

Query: 61  PPAFITGGEVIFNGEDILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITR 120
            P  I  GE+      I +  D  M++ R +E+  +FQ  + +LNP+ T+  Q  + I +
Sbjct: 61  KPGRIADGEIWLGSRRIDQLDDRAMESIRGREIGAIFQDPLTSLNPLFTVGAQLVETIRQ 120

Query: 121 HTNMTREQAKRRAEGLLEIVDIHPS---RLNDYPHQFSGGMRQRLVIAIALALNPKMIIM 177
           H  +++  A+ RA  LL  V I PS   R++ YPHQFSGGMRQR+VIA+AL+ +PK+II 
Sbjct: 121 HLPLSKADARARAIQLLRDVGI-PSPADRIDHYPHQFSGGMRQRVVIALALSASPKLIIA 179

Query: 178 DEPTTALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAP 237
           DEPTTALDV +Q +I+  +  L +E   +++ +THD+ ++ E +DR+ ++Y+G LIEV P
Sbjct: 180 DEPTTALDVSIQAQIISLLRRLCKEKQTAVMLVTHDMGVIAEAADRVAVLYAGRLIEVGP 239

Query: 238 SKQILETPYHPYTKGLGSSFPPLTGPKTKLTGIPGNPLNLLDIPQGCRFQARCDRVHEAC 297
            +Q+L  P HPYT+GL +S P L     +L  I G    L  IP GC F  RC      C
Sbjct: 240 VEQVLHEPRHPYTQGLMASIPSLGARVERLNQIDGAMPRLDAIPPGCAFNPRCSFAGPRC 299

Query: 298 TKVPTVLRQIEHG 310
            +    L  + +G
Sbjct: 300 LRQRPELETVGNG 312