Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  233 bits (593), Expect = 6e-66
 Identities = 127/320 (39%), Positives = 192/320 (60%), Gaps = 18/320 (5%)

Query: 5   LISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHKPPAF 64
           LI + +L V +    G  +    VSFD++PGE+  + GESG GKS  A  L+ L  P   
Sbjct: 4   LIEVHDLSVSF----GSAQPVKGVSFDVSPGEMLAIVGESGSGKSLTALGLIGL-LPSHA 58

Query: 65  ITGGEVIFNGEDILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITRHTNM 124
            TGG V   G D+L  S+ + +  R +++ M+FQ  M +LNPVLT+ EQ  +V+  H  +
Sbjct: 59  KTGGRVQLEGRDLLPLSERQWRGIRGRDIGMIFQEPMTSLNPVLTVGEQIIEVLRIHEKI 118

Query: 125 TREQAKRRAEGLLEIVDIHPS--RLNDYPHQFSGGMRQRLVIAIALALNPKMIIMDEPTT 182
            R QA++RA  LL++V+I  +  R++DYPHQ SGGMRQR++IAI +A NPK++I DE TT
Sbjct: 119 DRRQARKRAIELLDLVNIPDAARRVDDYPHQLSGGMRQRVMIAIGVACNPKLLIADEATT 178

Query: 183 ALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAPSKQIL 242
           ALDV +Q +ILQ +  L+ +   +++ ITHDL ++ +++DR+ +MY+G  +E    + + 
Sbjct: 179 ALDVTIQAQILQLLDNLRRDLNMAVILITHDLGIVAQWADRVMVMYAGRKVEEGLPEPVF 238

Query: 243 ETPYHPYTKGLGSSFPPL-------TGPKTKLTGIPGNPLNLLDIPQGCRFQARCDRVHE 295
             PYHPYT+GL ++ P          GP   L  IPG+ ++     +GC F+ RC     
Sbjct: 239 SNPYHPYTRGLLAASPRAEDGQHYRDGP---LIEIPGSIVSATG-ERGCAFRPRCPSARG 294

Query: 296 ACTKVPTVLRQIEHGRFSNC 315
            C +    LR I  GR++ C
Sbjct: 295 FCGQFVPPLRPISEGRYAAC 314