Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Dipeptide ABC transporter, ATP-binding protein DppF (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  222 bits (566), Expect = 9e-63
 Identities = 128/332 (38%), Positives = 196/332 (59%), Gaps = 12/332 (3%)

Query: 1   MSKPHGELLVEGKNLVKDFAINSNALKQPM-MRAINDVSFKMYKSRGLSVVGESGSGKST 59
           MS+    ++VE  NL + + I     + P  +RA+ D+SF++ + R L+VVGESG GKST
Sbjct: 1   MSEASTGVVVEATNLQRTYDIRRGLFRAPSHLRAVGDISFRIERGRTLAVVGESGCGKST 60

Query: 60  TAKMIAKMYAPTSGVIEYKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSLNPTHTIFHHI 119
            A+M+A +  PT+G +   G D  D  + +     R+ VQ+V+Q+P+GSLNP   I   +
Sbjct: 61  LARMVALIEKPTAGQLTLVGTDAVDTPA-ERKRELRQAVQLVFQNPYGSLNPRKKISAVL 119

Query: 120 ARPLLIHKKVTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIA 179
             PL I+   T   K+E   +  E+L +VGL P  A   +YPH  SGGQRQR+ +AR + 
Sbjct: 120 EDPLAIN---TTMGKQERAAKAREMLARVGLRPEYAN--RYPHMFSGGQRQRIAIARALM 174

Query: 180 VGAEVVLADEPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYV 239
           +   +++ADEP S LDVSI+A VLNL+ +++ E  ++ L+I+HD+   R+IA D+ VMY+
Sbjct: 175 LNPRLLVADEPVSALDVSIQAQVLNLLADLQAELGLAYLFISHDLGVVRHIAHDVLVMYL 234

Query: 240 GHMVEWGDTDEIIHDPQHPYTKLLVSAVPDPKKSIHEKLEGNKGEIPLWTPNSVGCPFAG 299
           GH VE G    I   P HPYT+ L+++ P     +  +    KGE+P       GC F+ 
Sbjct: 235 GHAVEQGPKSRIFSRPLHPYTQALLASTP----GLSSQRIVLKGELPSPLNPPAGCVFST 290

Query: 300 RCLYASAKCREALPEVTQLSDNHFVRCYLFEK 331
           RC + + +CR+  P + ++ D   V C+  EK
Sbjct: 291 RCPHVAERCRQERP-LPRMLDERLVACHYSEK 321