Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  201 bits (512), Expect = 2e-56
 Identities = 119/302 (39%), Positives = 179/302 (59%), Gaps = 14/302 (4%)

Query: 30  MMRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMYAPTSGVIEYKGRDIQDIVSRD 89
           +++A++ VSF++ +   L+VVGESGSGK+TTA  + ++   TSG +     D+  +   +
Sbjct: 33  VVKAVDGVSFEIRRGTTLAVVGESGSGKTTTALAVMRLSPVTSGRMRLGDTDLAALRG-E 91

Query: 90  DLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLIHKKVTPGNKKELEERVYELLEQVG 149
            L   R  +Q+++QDPF SLNP       +  PL + +  TP    E   RV EL E VG
Sbjct: 92  ALRQARTRMQIIFQDPFSSLNPRERAGAAVRAPLDLMRVGTPD---ERTRRVAELFEAVG 148

Query: 150 LIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLADEPTSMLDVSIRAGVLNLMEEM 209
           L P +     +PHQ SGGQRQR+N+AR +A   E+V+ DEP S LD++IRA +LNL+  +
Sbjct: 149 LRPEQQHL--FPHQFSGGQRQRINIARALATNPELVVCDEPVSALDIAIRAQILNLLSRL 206

Query: 210 KFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGDTDEIIHDPQHPYTKLLVSAVP- 268
           + E  ++ L+I+HD+A   +I +D+AVMY+G +VE          P HPY+  L+SAVP 
Sbjct: 207 QRELGLTYLFISHDMAVVEHICDDIAVMYLGQIVERAPRRSFFARPLHPYSVALMSAVPT 266

Query: 269 ---DPKKSIHE-KLEGNKGEIPLWTPNSVGCPFAGRCLYASAKCREALPEVTQLSDNHFV 324
                +++ H  KL G+    P+  P   GC FAGRC  A   C   LP + +++ +H+V
Sbjct: 267 VSGGRRRAAHRIKLSGDPPS-PIDPP--AGCRFAGRCPVAEPACAAELPPLREVAPDHWV 323

Query: 325 RC 326
           RC
Sbjct: 324 RC 325