Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  206 bits (524), Expect = 6e-58
 Identities = 114/318 (35%), Positives = 184/318 (57%), Gaps = 10/318 (3%)

Query: 9   LVEGKNLVKDFAINSNALKQPMMRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMY 68
           L+E + L K F  +   +     RA++DVSF +     L +VGESGSGKST  + + ++ 
Sbjct: 7   LIEVRGLKKYFGSSDRPV-----RAVDDVSFAIQPGETLGLVGESGSGKSTIGRTVLRLL 61

Query: 69  APTSGVIEYKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLIHKK 128
             TSG + Y+G DI   +S + +   R  +Q+++QDP+ SLNP   I   +   L  H  
Sbjct: 62  ERTSGQVLYRGDDI-GALSGERMRKLRSKLQIIFQDPYASLNPKMRISAILGEALSTHGL 120

Query: 129 VTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLAD 188
                 ++  +R+ ELLE VGL    A+  ++PH+ SGGQRQR+ +AR +AV  E ++AD
Sbjct: 121 HKGAAARD--KRIAELLETVGLRAEHAS--RFPHEFSGGQRQRIGVARALAVEPEFIVAD 176

Query: 189 EPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGDT 248
           EP S LDVSI++ V+NL+ +++    +++L+I+HD+    Y+ + + V+Y+G ++E   T
Sbjct: 177 EPLSALDVSIQSQVINLLADLRERLGLTMLFISHDLDVVEYLCDRVVVLYLGKVMEVATT 236

Query: 249 DEIIHDPQHPYTKLLVSAVPDPKKSIHEKLEGNKGEIPLWTPNSVGCPFAGRCLYASAKC 308
           DE+   P HPYT+ L++A P P   +  +    KG+IP       GC F  RC +A   C
Sbjct: 237 DELFARPSHPYTRALLAASPKPDPEVATERIALKGDIPSPISPPSGCVFRTRCPHAIEAC 296

Query: 309 REALPEVTQLSDNHFVRC 326
            + +P + ++S  H+  C
Sbjct: 297 AQTVPPLEEISAGHYSAC 314