Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., Oligopeptide ABC transporter, ATP-binding protein OppF (TC 3.A.1.5.1) from Variovorax sp. SCN45

 Score =  221 bits (562), Expect = 3e-62
 Identities = 115/305 (37%), Positives = 189/305 (61%), Gaps = 7/305 (2%)

Query: 27  KQPMMRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMYAPTSGVIEYKGRDIQDIV 86
           ++P ++A++ VSF + +   LS+VGESG GK+TTAK + ++  P++G ++ +G ++  + 
Sbjct: 29  RKPPIQAVDGVSFSVARGETLSLVGESGCGKTTTAKSVLRLVEPSAGSVQLEGEELLTL- 87

Query: 87  SRDDLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLIHKKVTPGNKKELEERVYELLE 146
           S +++   R  +Q+++QDP+ SLNP  T    +A P+     +  G   E  ERV  L  
Sbjct: 88  SPEEMRMRRRDLQIIFQDPYASLNPRLTAGDIVAEPMRNFSSLGTGGAAERRERVQWLFS 147

Query: 147 QVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLADEPTSMLDVSIRAGVLNLM 206
           +VGL P    A KYPH+ SGGQRQR+ +AR +A+  ++++ DEP S LDVS++A V+NL+
Sbjct: 148 RVGLRPE--AAKKYPHEFSGGQRQRLGIARALALNPKLIVCDEPVSALDVSVQAQVVNLL 205

Query: 207 EEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGDTDEIIHDPQHPYTKLLVSA 266
            +++ E  ++ L++ HD+A  R+I+  +AVMY+GH+VE  D D +   P HPYT++L+SA
Sbjct: 206 MDLQAEFGIAYLFVAHDLAVVRHISHRVAVMYLGHIVEIADRDTLFSAPLHPYTEILLSA 265

Query: 267 VPDPKKSIHEKLEGNKGEIPLWTPNSVGCPFAGRCLYASAKCREALPEVTQ----LSDNH 322
           VP P      +    +G+ P       GC F  RC  A A C+E +PE+++     +  H
Sbjct: 266 VPVPNPRTPARRMLLQGDPPSPANPPSGCRFHTRCPMAQAVCKEKVPELSERPSSSNGGH 325

Query: 323 FVRCY 327
           +V C+
Sbjct: 326 WVACH 330