Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  228 bits (580), Expect = 2e-64
 Identities = 125/333 (37%), Positives = 202/333 (60%), Gaps = 13/333 (3%)

Query: 6   GELLVEGKNLVKDFAINSNALKQPMMR-------AINDVSFKMYKSRGLSVVGESGSGKS 58
           GE LV   +L + F ++   L + + R       A++ VSF + + + L++VGESG GKS
Sbjct: 16  GEPLVVAHDLARTFDVSPPWLNRVLERKPRVLLHAVDGVSFSIERGKTLALVGESGCGKS 75

Query: 59  TTAKMIAKMYAPTSGVIEYKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSLNPTHTIFHH 118
           T A+++  +YAPT G +++ G+D        +    R  +QM++QDP+ SLNP   +   
Sbjct: 76  TVARLLVGLYAPTRGGLQFDGQDAHAAFKTSEGRKLRRRIQMIFQDPYASLNPRWIVEDI 135

Query: 119 IARPLLIHKKVTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNI 178
           I  PL  H  ++  +K  L ERV ELL+ VGL P     +KYPHQ SGGQRQR+++AR +
Sbjct: 136 IGEPLREHGIIS--DKAALRERVGELLKSVGLSP--LDMSKYPHQFSGGQRQRISIARAL 191

Query: 179 AVGAEVVLADEPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMY 238
           A   E ++ DEPTS LDVS++A VLN+M++++ E+ ++ L+I+H++A  R++A+ + VMY
Sbjct: 192 ATQPEFLVCDEPTSALDVSVQAQVLNIMKDLQREQGLTYLFISHNLAVVRHVADQVGVMY 251

Query: 239 VGHMVEWGDTDEIIHDPQHPYTKLLVSAVPDPKKSIHEKLEGNKGEIPLWTPNSVGCPFA 298
           +G +VE  D  ++   PQHPYT++L+ A+P  K +   +    +GE+P       GC F 
Sbjct: 252 LGRLVEVADKQKLFAAPQHPYTRMLLDAIPQMKHTGRSRTP-VQGEVPNPLNPPTGCAFH 310

Query: 299 GRCLYASAKCREALPEVTQLSDNHFVRCYLFEK 331
            RC +A+A+C    P++  ++    V C+  E+
Sbjct: 311 PRCPHANARCSAERPKLLGIAGVQ-VACHAVEE 342