Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  193 bits (491), Expect = 4e-54
 Identities = 113/319 (35%), Positives = 168/319 (52%), Gaps = 7/319 (2%)

Query: 16  VKDFAINSNALKQPMMRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMYAPTSGVI 75
           VKD  I     + P   A+  + F + +   L +VGESG GKS T   +  +   T+ V 
Sbjct: 6   VKDLHIELQTQRGPA-EAVRGIDFTLERGETLGIVGESGCGKSITVMSLMGLLPSTAKVT 64

Query: 76  EYKGRDIQDIVSRD--DLMHYREG-VQMVWQDPFGSLNPTHTIFHHIARPLLIHKKVTPG 132
                D  ++V RD  D+   R   + M++Q+P  +LNP HTI   +  PL +H+ ++  
Sbjct: 65  GSIRFDGTELVGRDEKDMCQIRGNRIGMIFQEPMTALNPVHTIARQVGEPLRLHRGLS-- 122

Query: 133 NKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLADEPTS 192
            K +  + V  LLE+VG+    +    YPHQ SGGQRQR+ +A  +A G ++++ADEPT+
Sbjct: 123 -KADARKEVLALLERVGIPDAASRLDAYPHQFSGGQRQRIGIAMALACGPDLLIADEPTT 181

Query: 193 MLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGDTDEII 252
            LDV+I+  +L L++ +  ER M+L+ I+HD+         + VMY G +VE G T+ + 
Sbjct: 182 ALDVTIQKQILELIQSLVAERGMALILISHDLGVIAQTVSKMLVMYGGSVVESGPTEAVF 241

Query: 253 HDPQHPYTKLLVSAVPDPKKSIHEKLEGNKGEIPLWTPNSVGCPFAGRCLYASAKCREAL 312
               HPYT+ L +A P        +L   KG +P       GCPFAGRC Y    C    
Sbjct: 242 ARRAHPYTQGLFAARPAIGAPRGLRLATIKGSVPELVDLPKGCPFAGRCSYTVDACHTTR 301

Query: 313 PEVTQLSDNHFVRCYLFEK 331
           P  T L  +H VRC   E+
Sbjct: 302 PPATMLPHDHAVRCIRLEE 320