Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  200 bits (508), Expect = 5e-56
 Identities = 111/326 (34%), Positives = 188/326 (57%), Gaps = 12/326 (3%)

Query: 9   LVEGKNLVKDFAINSNALK-QPMMRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKM 67
           L+   +L K + +       + +++A++ VSF + + + L+VVGESG GKST  +++  +
Sbjct: 12  LLRAIDLKKHYPVKKGIFSPERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMI 71

Query: 68  YAPTSGVIEYKGRDIQDIVSRDDLMHY--REGVQMVWQDPFGSLNPTHTIFHHIARPLLI 125
             PT G + Y+G   QD++  D       R+ +Q+V+Q+P+GSLNP   +   +  PLLI
Sbjct: 72  ETPTGGELYYQG---QDLLKHDPHAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPLLI 128

Query: 126 HKKVTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVV 185
           +  ++   K +  E+   ++ +VGL        +YPH  SGGQRQR+ +AR + +  +VV
Sbjct: 129 NTSLS---KAQRREKALAMMAKVGLKTEHYD--RYPHMFSGGQRQRIAIARGLMLDPDVV 183

Query: 186 LADEPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEW 245
           +ADEP S LDVS+RA VLNLM +++ +  +S ++I+HD++   +IA+++ VMY+G  VE 
Sbjct: 184 IADEPVSALDVSVRAQVLNLMMDLQQDMGLSYVFISHDLSVVEHIADEVMVMYLGRCVEK 243

Query: 246 GDTDEIIHDPQHPYTKLLVSAVPDPKKSIHEKLEGNKGEIPLWTPNSVGCPFAGRCLYAS 305
           G  ++I ++P+HPYT+ L+SA P        +     GE+P       GC F  RC    
Sbjct: 244 GTKEQIFNNPRHPYTQALLSATPRLNPDDRRERIKLTGELPSPLNPPPGCAFNARCSRRF 303

Query: 306 AKCREALPEVTQLSDNHFVRCYLFEK 331
             C +  P++ +  D   V C+  ++
Sbjct: 304 GPCTQLQPQLKEY-DGQLVACFAVDQ 328