Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., oligopeptide transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  212 bits (540), Expect = 9e-60
 Identities = 117/299 (39%), Positives = 186/299 (62%), Gaps = 10/299 (3%)

Query: 31  MRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMYAPTSGVIEYKGRDIQDIVSRDD 90
           ++A++ V+ ++Y+   L VVGESG GKST A+ I  +   T G + + G+++  +   D+
Sbjct: 37  LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGHVAWLGKELLGM-KPDE 95

Query: 91  LMHYREGVQMVWQDPFGSLNPTHTIFHHIARPL-LIHKKVTPGNKKELEERVYELLEQVG 149
               R  +QM++QDP  SLNP  TI   IA PL   H K++   ++E+ ERV  ++ +VG
Sbjct: 96  WRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKMS---RQEVRERVKAMMLKVG 152

Query: 150 LIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLADEPTSMLDVSIRAGVLNLMEEM 209
           L+P      +YPH+ SGGQ QR+ +AR + +  ++++ DEP S LDVSI+A V+NL++++
Sbjct: 153 LLPNLIN--RYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQL 210

Query: 210 KFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGDTDEIIHDPQHPYTKLLVSAV-- 267
           + E  +SL++I HD+A  ++I++ + VMY+GH VE G  DE+ H+P HPYT+ L+SAV  
Sbjct: 211 QREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTRALMSAVPI 270

Query: 268 PDPKKSIHEKLEGNKGEIPLWTPNSVGCPFAGRCLYASAKCREALPEVTQLSDNHFVRC 326
           PDP    ++ ++  +GE+P       GC F  RC  A  +C +  P V + S  H V C
Sbjct: 271 PDPDLEKNKTIQLLEGELPSPINPPSGCVFRTRCPIAGPECAKTRP-VLEGSFRHSVSC 328