Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., dipeptide ABC transporter ATP-binding protein from Escherichia coli ECRC62

 Score =  194 bits (492), Expect = 3e-54
 Identities = 109/300 (36%), Positives = 170/300 (56%), Gaps = 8/300 (2%)

Query: 32  RAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMYAPTSGV----IEYKGRDIQDIVS 87
           RA++ +S+ + +   + +VGESGSGKS ++  I  +      V    +E+ G+D+Q I  
Sbjct: 21  RAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE 80

Query: 88  RDDLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLIHKKVTPGNKKELEERVYELLEQ 147
           ++        V M++QDP  SLNP +T+   I   + +H+    GNK    +R  +LL Q
Sbjct: 81  KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQG---GNKSTRRQRAIDLLNQ 137

Query: 148 VGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLADEPTSMLDVSIRAGVLNLME 207
           VG+  P +    YPHQLSGG  QRV +A  IA   ++++ADEPT+ LDV+I+A ++ L+ 
Sbjct: 138 VGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLL 197

Query: 208 EMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGDTDEIIHDPQHPYTKLLVSAV 267
           E++ +  M+L+ ITHD+A     A  + VMY G +VE GD   I H P+HPYT+ L+ A+
Sbjct: 198 ELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHAIFHAPRHPYTQALLRAL 257

Query: 268 PDPKKSIHEKLEGNKGEIPLWTPNSVGCPFAGRCLYASAKCREALPEVTQLSDNHFVRCY 327
           P+  +   E+L    G +P       GC    RC YA+ +CR   P +  L+D    +C+
Sbjct: 258 PEFAQD-KERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCH 316