Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 603 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  199 bits (507), Expect = 1e-55
 Identities = 109/260 (41%), Positives = 166/260 (63%), Gaps = 8/260 (3%)

Query: 13  KNLVKDFAINSN--ALKQPMMRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMYAP 70
           KNLV  F I S   A +   + A+ +VSF +++   LS+VGESG GKSTT + I ++  P
Sbjct: 306 KNLVTRFPIRSGLWARQTGAVHAVENVSFDLFQGETLSLVGESGCGKSTTGRSIMRLVEP 365

Query: 71  TSGVIEYKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLIHKKVT 130
           +SG +   G D+  +     L + R+ VQM++QDPF SLNP  T+   I+ P + H+   
Sbjct: 366 SSGDVSLDGYDVMRL-DTVGLRNMRKSVQMIFQDPFSSLNPRMTVGTAISEPFIKHRL-- 422

Query: 131 PGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLADEP 190
            G+ K+ +E+  +LLE+VGL    A   +YPH+ SGGQRQR+ +AR +A+  +V++ADE 
Sbjct: 423 -GSTKQAKEKTADLLEKVGLSADMAN--RYPHEFSGGQRQRIAIARALALDPKVIVADES 479

Query: 191 TSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGDTDE 250
            S LDVSI+A V NL+ +++    ++ L+I+HD+A    ++  +AVMY+G +VE G    
Sbjct: 480 VSALDVSIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAA 539

Query: 251 IIHDPQHPYTKLLVSAVPDP 270
           +  +PQHPYTK L++AVP P
Sbjct: 540 VFDNPQHPYTKKLMAAVPVP 559



 Score =  166 bits (419), Expect = 2e-45
 Identities = 97/260 (37%), Positives = 149/260 (57%), Gaps = 12/260 (4%)

Query: 13  KNLVKDFAINSNALKQPMMRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMYAPTS 72
           +NL   F ++           + DVSF +     +++VGESGSGKS T+  + ++ AP S
Sbjct: 10  RNLTTSFLVDGE-----WKSVVRDVSFDVKSGETVAIVGESGSGKSVTSLSLMRLLAPAS 64

Query: 73  GVIE----YKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLIHKK 128
             IE      GR++  +  R+        + M++Q+P  SLNP  TI   I+  L+ HK 
Sbjct: 65  SHIEGEVLLNGRNLLTLSEREMRGVRGNDISMIFQEPMTSLNPIFTIGRQISEVLIRHKG 124

Query: 129 VTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLAD 188
           ++   K+E       LLE+V +    +   +YPHQ SGG RQRV +A  +A   ++++AD
Sbjct: 125 LS---KQEARAETVRLLEKVRIPNAASRFDEYPHQFSGGMRQRVMIAMALASRPKLLIAD 181

Query: 189 EPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGDT 248
           EPT+ LDV+I+  +L+L++ ++ E  MS+L+ITHD+     IA+   VMY G  VE G T
Sbjct: 182 EPTTALDVTIQGQILDLIKLLQEEEGMSVLFITHDMGVVAEIADRTIVMYRGDAVETGAT 241

Query: 249 DEIIHDPQHPYTKLLVSAVP 268
           ++I    QHPYT+ L+SAVP
Sbjct: 242 EDIFRRGQHPYTRALLSAVP 261