Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  215 bits (548), Expect = 1e-60
 Identities = 123/325 (37%), Positives = 193/325 (59%), Gaps = 22/325 (6%)

Query: 13  KNLVKDFAINSNALKQPMMR-------AINDVSFKMYKSRGLSVVGESGSGKSTTAKMIA 65
           K L K F +++  L + + R       A+ND+ F +     LS+VGESG GKST A+++ 
Sbjct: 19  KGLTKTFDVSAPLLNRIIERKPRQFVQAVNDIDFAVPAGGCLSIVGESGCGKSTVARLVT 78

Query: 66  KMYAPTSGVIEYKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLI 125
            ++ P++G  ++        +S           QM++QDP+ SLNP   + + IA P  I
Sbjct: 79  GLFRPSAGAFQFASGGNGKPLS----------AQMIFQDPYASLNPRWRVKNIIAEP--I 126

Query: 126 HKKVTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVV 185
            +      K E  ERV ELL+ VGL    +   K+PH+ SGGQRQR+++AR +A   E +
Sbjct: 127 RELKLRATKAEAMERVEELLQTVGL--SASDGEKFPHEFSGGQRQRISIARALASEPEFL 184

Query: 186 LADEPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEW 245
           + DEPTS LDVS++A VLNLM  ++ E  ++ L+I+HD++  R++++ +AVMY+G +VE 
Sbjct: 185 VCDEPTSALDVSVQAQVLNLMRRLQDELGLTYLFISHDMSVVRHMSDRIAVMYLGRIVEE 244

Query: 246 GDTDEIIHDPQHPYTKLLVSAVPDPKKSIHEKLEGNKGEIPLWTPNSVGCPFAGRCLYAS 305
           GDT+E+  +P+HPYT+LL+  +P+ K    ++ E   GE+P       GC F  RC  A+
Sbjct: 245 GDTEELFANPRHPYTRLLLQTIPNIKTPQRDR-EIVAGEVPSPLKPPSGCAFHPRCPLAT 303

Query: 306 AKCREALPEVTQLSDNHFVRCYLFE 330
           A+C   +P+V  L++   V C+L E
Sbjct: 304 AQCSAEVPKVKSLANGTRVACHLVE 328