Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  191 bits (484), Expect = 5e-53
 Identities = 109/280 (38%), Positives = 168/280 (60%), Gaps = 7/280 (2%)

Query: 9   LVEGKNLVKDFAINSNALKQPMMR--AINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAK 66
           L+  K+L   F I  N   +   R  A+  VSF ++    L++VGESGSGKST  + I +
Sbjct: 304 LLSVKDLFVRFDIRKNLFGKATHRLSAVQKVSFDIHAGETLALVGESGSGKSTIGRTIQQ 363

Query: 67  MYAPTSGVIEYKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLIH 126
           +    SG I + GR    + S  +    R+ VQ ++QDPF SL+P  T+   IA P+  H
Sbjct: 364 LQTAVSGEIAFNGRSYSQM-SAAERFRMRQEVQYIFQDPFASLDPRKTVGFSIAEPINTH 422

Query: 127 KKVTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVL 186
             +   ++K +  RV ELLE+VGL      AA+YPH+ SGGQRQRV +AR +A   ++++
Sbjct: 423 GLIN--DQKAVRRRVDELLERVGL--SSEHAARYPHEFSGGQRQRVCIARALASDPKLII 478

Query: 187 ADEPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWG 246
           ADE  S LDVSI+A ++NL  +++ ER ++ L+I+HD+A    ++  +AV+Y+G ++E G
Sbjct: 479 ADEALSALDVSIQAQIINLFMDLQAERGLAYLFISHDMAVVEKMSHRVAVLYLGQIMELG 538

Query: 247 DTDEIIHDPQHPYTKLLVSAVPDPKKSIHEKLEGNKGEIP 286
              ++   P H YT+ L+SAVP    +I  ++   +GEIP
Sbjct: 539 SRQQVFETPTHDYTRRLLSAVPVADPTIERRIAMIEGEIP 578



 Score =  171 bits (432), Expect = 6e-47
 Identities = 94/242 (38%), Positives = 150/242 (61%), Gaps = 8/242 (3%)

Query: 32  RAINDVSFKMYKSRGLSVVGESGSGKSTTA---KMIAKMYAPT--SGVIEYKGRDIQDIV 86
           R ++D+SF++   R ++VVGESGSGKS T+     +A M   T  +G I ++G+D+    
Sbjct: 23  RVVDDISFRVEPGRTVAVVGESGSGKSVTSLSTMRLADMMGATYPTGKILFEGKDLLKAS 82

Query: 87  SRDDLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLIHKKVTPGNKKELEERVYELLE 146
            ++      + + M++Q+P  SLNP  TI   I   L++H+K+    K    E+  +LL+
Sbjct: 83  QKEMRSIRGKEIAMIFQEPMTSLNPVFTIGDQICEVLVLHEKL---GKTAAMEQAKQLLD 139

Query: 147 QVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLADEPTSMLDVSIRAGVLNLM 206
            V L        +YPHQLSGG RQRV +A  +A   ++++ADEPT+ LDV+I+A +LN+M
Sbjct: 140 MVRLPDAAELLHRYPHQLSGGMRQRVMIAMALACRPKLLIADEPTTALDVTIQAQILNIM 199

Query: 207 EEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGDTDEIIHDPQHPYTKLLVSA 266
            +++ +  M +++ITHD+     +A+D+ VM+ G  VE G   +I  +PQHPYT+ L+SA
Sbjct: 200 RDLQKKLGMGMVFITHDMGVVAEMADDVVVMWKGKKVEEGPVKDIFANPQHPYTRALLSA 259

Query: 267 VP 268
           VP
Sbjct: 260 VP 261