Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  218 bits (554), Expect = 2e-61
 Identities = 118/297 (39%), Positives = 179/297 (60%), Gaps = 8/297 (2%)

Query: 31  MRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMYAPTSGVIEYKGRDIQDIVSRDD 90
           +RA++DVS  +     +++VGESG GKS+  K + ++  P+SG I +KG D+  + S   
Sbjct: 20  VRAVDDVSLDIEAGETVALVGESGCGKSSLGKSLMRLVEPSSGRITFKGADVTAMTS-SQ 78

Query: 91  LMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLIHKKVTPGNKKELEERVYELLEQVGL 150
           L   R  +QM++QDPF SLNP  T+   +  PL +H     G++    E V  ++ QVGL
Sbjct: 79  LRGIRRRIQMIFQDPFASLNPRQTVRTILTAPLKVHGI---GDRARQREIVEAIVAQVGL 135

Query: 151 IPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLADEPTSMLDVSIRAGVLNLMEEMK 210
            PP A   +YPH+ SGGQRQR+ +AR + +  E+V+ DEP S LD+SI+A +LNL+ EMK
Sbjct: 136 -PPDALD-RYPHEFSGGQRQRIGIARALVLEPELVVCDEPVSALDLSIQAQILNLLVEMK 193

Query: 211 FERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGDTDEIIHDPQHPYTKLLVSAVPDP 270
               +S L+++HD++  RY ++ + VMY+G +VE   T E+   P+HPYT+ L++AVPDP
Sbjct: 194 KRLSLSYLFVSHDLSVVRYFSDRVLVMYLGKIVESAPTAELWASPKHPYTRALLAAVPDP 253

Query: 271 KKSIHEKLEGNKGEIPLWTPNSVGCPFAGRCLYASAKCREALPEVTQLSDNHFVRCY 327
            +   ++     G++P       GC F  RC  A+  CRE  P+      NH V C+
Sbjct: 254 AR--RKQAAPISGDLPSPHDPPAGCRFHTRCPLATDLCREKAPDYALFGKNHAVACH 308