Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  194 bits (494), Expect = 4e-54
 Identities = 112/265 (42%), Positives = 168/265 (63%), Gaps = 10/265 (3%)

Query: 8   LLVEGKNLVKDFAINSNALKQPMMR--AINDVSFKMYKSRGLSVVGESGSGKSTTAKMIA 65
           L VEG  L K F I+S  L +   R  A+ +VSF +     LS+VGESG GKSTT + I 
Sbjct: 312 LKVEG--LTKRFDIHSGLLGRLSGRVHAVENVSFDLRAGETLSLVGESGCGKSTTGRAIM 369

Query: 66  KMYAPTSGVIEYKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLI 125
           ++  P +G +   G +I  +  +  +   R+ VQM++QDPF SLNP  T+   IA P L 
Sbjct: 370 RLIEPDAGSVVVNGENILTL-DKSGMREMRKTVQMIFQDPFASLNPRMTVGAAIAEPFLE 428

Query: 126 HKKVTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVV 185
           H+    G+ +E +E V ++L +VGL P  A  A+YPH+ SGGQRQR+ +AR +A+  +V+
Sbjct: 429 HRM---GSAREAKEVVADMLNKVGLSPDMA--ARYPHEFSGGQRQRICIARALALQPKVI 483

Query: 186 LADEPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEW 245
           +ADE  S LDVSI+A V+NLM +++    ++ L+I+HD+A    ++  +AVMY+G +VE 
Sbjct: 484 VADESVSALDVSIKAQVINLMLDLQQSLDLAFLFISHDMAVVERVSHRVAVMYLGEIVEI 543

Query: 246 GDTDEIIHDPQHPYTKLLVSAVPDP 270
           G   ++  +PQH YT+ L++AVP P
Sbjct: 544 GPRADVFDNPQHDYTRKLMAAVPVP 568



 Score =  157 bits (396), Expect = 9e-43
 Identities = 99/261 (37%), Positives = 151/261 (57%), Gaps = 14/261 (5%)

Query: 13  KNLVKDFAINSNALKQPMMRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMYAPTS 72
           +NL   F ++     +P++R   D+SF +     +++VGESGSGKS T+  I ++    S
Sbjct: 19  RNLTTSFHVDGGW--KPVVR---DISFDVGPGETVAIVGESGSGKSVTSLSIMRLLDRES 73

Query: 73  ----GVIEYKGRDIQDIVSRDDLMHYREG-VQMVWQDPFGSLNPTHTIFHHIARPLLIHK 127
               G I   GR++  + S D +   R   V M++Q+P  SLNP  TI   I+  LL H+
Sbjct: 74  SRVQGEILLGGRNLLSL-SEDAMRRVRGNEVAMIFQEPMTSLNPLFTIGDQISEALLCHQ 132

Query: 128 KVTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLA 187
              P +K E       LLE+V +    +   +YPH+ SGG RQRV +A  +A   ++++A
Sbjct: 133 ---PMSKAEARAETVRLLEKVRIPSAASRFDEYPHRFSGGMRQRVMIAMALASKPKLLIA 189

Query: 188 DEPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGD 247
           DEPT+ LDV+I+  +L+L++ ++ E   S+L+ITHD+     IA+   VMY G  VE G 
Sbjct: 190 DEPTTALDVTIQGQILDLIKTLQEEEGTSVLFITHDMGVVAEIADRTVVMYRGEQVEVGA 249

Query: 248 TDEIIHDPQHPYTKLLVSAVP 268
           T +I H  +HPYT+ L+SAVP
Sbjct: 250 TADIFHRGKHPYTRALLSAVP 270