Pairwise Alignments

Query, 637 a.a., beta-N-acetylhexosaminidase from Vibrio cholerae E7946 ATCC 55056

Subject, 885 a.a., carbohydate-binding domain-containing protein from Serratia liquefaciens MT49

 Score =  216 bits (550), Expect = 3e-60
 Identities = 208/758 (27%), Positives = 324/758 (42%), Gaps = 151/758 (19%)

Query: 20  GLTLHNLSDQDLHDWSLYFVIDRYIQPMSVTNGQLT---QVGSLCSIVPTEKVLQANGHF 76
           GLT  N  + +  DW++YF   R  Q + V N Q       G L  + PT+K        
Sbjct: 72  GLTNDN-QEINGQDWAIYFHSAR--QTLRVDNDQFKISHLTGDLYKLEPTDKFTGFPAGK 128

Query: 77  YCEFIIKTAPYH-FYTDGVKHAFVQLNDKQP-------VERINVAVNP------------ 116
             E  I T  +  F TD V   +    D +P        E +N  V P            
Sbjct: 129 TVEIPIITEYWQLFKTDFVPRWYATSGDAKPKILVNTDTEDLNQFVAPFTGDQWKRTKDD 188

Query: 117 ----IVLASPFRERSQIPEVTAAELCLIPKPNSLQRFQGEFVVNHSSQISLQSDSAARAA 172
               +  AS F + +++  +    L     P  LQ       V+ S  ++L+  + ++ A
Sbjct: 189 NNILMTPASRFTKNAELKTLPTTSLRGQIVPTPLQVKVHAQDVDLSKGVALELSALSKPA 248

Query: 173 RWLEQELHALHEFKLNTVGH---SDI---VYRSNPTLDEGHYQLNIEAQGIKIEAGSHSG 226
                +  AL     N  G+   +DI   +++    +  G Y+L I  Q  ++     +G
Sbjct: 249 ADAVAQRFALLGITSNAAGYPIKTDIQPGIFKGELAVP-GAYELIIGKQEARVIGFDQTG 307

Query: 227 FMHASATLLQLAQAHQGSLRFPLVNIVDAPRFKYRGMMLDCARHFHSLEQVKRVINQLAH 286
             +   ++L L    +GS +   +   DAPR +YRG+ LD AR+FH  + V R+++Q+A 
Sbjct: 308 VFYGLQSILSLVPT-EGSAKIATLEAKDAPRLQYRGIFLDVARNFHQKDAVLRLLDQMAA 366

Query: 287 YKFNVFHWHLTDDEGWRIEIKRLPQLTDIGAWRGMD----EVLEPQYSLLTERHGGFYTQ 342
           YK N FH+HL+DDEGWRI I  LP+LT++G  R  D      L PQY    E +GGF+++
Sbjct: 367 YKLNKFHFHLSDDEGWRIAIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPEVYGGFFSR 426

Query: 343 DEIRAVIEYASDRGITVIPEIDVPGHSRAAIKALPAW-----------------LVDEED 385
            +   +I+YA  R I VIPEID+P H+RAA+ ++ A                  LVD  D
Sbjct: 427 QDYIDIIKYAKARQIEVIPEIDMPAHARAAVVSMEARYKKLHAAGKEQEANEFRLVDPTD 486

Query: 386 CSQYRSIQYYN-DNVLSPALPGTYQFLDIVLEEVAALF-----PSQFIHIGADEVPH--- 436
            S   S+QY+N  + L+P L  + +F+D V+ E+A +      P    H G DE  +   
Sbjct: 487 TSNTTSVQYFNRQSYLNPCLDSSKRFVDKVIGEIAQMHKEAGQPLSTWHFGGDEAKNIRL 546

Query: 437 --------------GV---------WVDSPKCQALMQEQGYTDPKELQGHLLRYAEKKLK 473
                         G+         W  S  CQA++++    D + L  +      + +K
Sbjct: 547 GAGYTDVNKPEAGKGIIDQSKEDKPWAKSQVCQAMIKDGKVADMEHLPSYFGVEVSQLVK 606

Query: 474 SLG-KRMVGWEEAHHGDKVSK------------DTVIYSWLSEKAALDCAKQGFDVILQP 520
           + G  RM  W++     K +K            DT+   W    +A D A +G+++IL  
Sbjct: 607 AHGIDRMQAWQDGLKDAKNAKAFATQRVGVNFWDTLY--WGGFDSANDWANKGYELILSN 664

Query: 521 GQFTYLDIVQDYAPEEPGVDWAG-VTPLERAYGYEPLADVPAN----------------D 563
             + Y+D   +  P+E G  W    +  ++ + + P  ++P N                D
Sbjct: 665 PDYVYMDFPYEVNPDERGYYWGTRFSDEQKMFSFAP-NNLPQNAETSVDRDGNHFTAKSD 723

Query: 564 PLRKRILGIQCALWCELINNSERMEYMLYPRLTALAEGGW-------------------- 603
                  GI   +W E     E+MEYM++PR  ++AE  W                    
Sbjct: 724 KPWPGAYGISAQMWSETQRTDEQMEYMIFPRSLSVAERAWHRAEWEQDYRAGREYKGGET 783

Query: 604 ----TEKSQRDWLDYLARLKG--HLPLLDKQKIPYRAP 635
               T+K  RDWL + A L G   L  LDK  + YR P
Sbjct: 784 HFIDTKKLDRDWLRF-ANLLGQRELAKLDKGGVNYRLP 820