Pairwise Alignments

Query, 343 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., Vitamin B12 import ATP-binding protein BtuD from Xanthobacter sp. DMC5

 Score =  229 bits (583), Expect = 1e-64
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 20/327 (6%)

Query: 5   LLIENLTCQYDAQTVLKSLSLQVNPGEIVCLLGASGCGKTTLLKAIAGLLPLASGQLSLN 64
           L +  LT +YD  T +  L++ V  GE+V  LG SGCGKTT L+ IAGL+P +SG + ++
Sbjct: 19  LSLRGLTRRYDHFTAVDDLNIDVAKGELVAFLGPSGCGKTTSLRMIAGLVPASSGHIVVD 78

Query: 65  CVTLDDGKRWLPPEQRNIGMIFQDYALFPHLTVAQNVGFGLDAMPAKQKEA--KIAEMLA 122
              L      + P +R++G++FQ YALFPH+ +A+NV FGL+     + EA  ++ E +A
Sbjct: 79  GRDLTG----VAPYKRDMGLVFQSYALFPHMDIARNVAFGLEVRKVPKAEAAQRVKEAIA 134

Query: 123 LVHLDAFAERYPHQLSGGQQQRVAIARALAYKPDLLLLDEPFSNIDTQVRHELIIEIRKI 182
           +V L       P QLSGGQQQRVA+ARAL  +P +LLLDEP SN+D ++R E+  EIR I
Sbjct: 135 MVRLTGREHHRPAQLSGGQQQRVALARALVVRPSILLLDEPLSNLDAKLRDEMRTEIRDI 194

Query: 183 FKQQGVTAIFVTHSREEAFAFADKMAVMNRGVIEQYGTAAELYYQPSSQFVADFLGGGSY 242
            K+ G+TAIFVTH + EA    DK+ VMN G +EQ GT  E+Y  P + FVA F+G  + 
Sbjct: 195 QKRLGITAIFVTHDQMEALTICDKVVVMNHGRLEQVGTPHEIYEHPKTAFVAGFVGRINR 254

Query: 243 LSAKRISETQYQTALGVVEAIARQPIAVEAECKLLLRPQQVQIRAE--------EESSVT 294
           LS +          +  V  IA      E +  +++RP ++ +            + S T
Sbjct: 255 LSGRA------SGGVAQVAGIAVSAPGFEGDVDVMVRPHRMVLSTGAAPADAGLHQLSGT 308

Query: 295 VTEQQFMGDHCRYLIDAHGTQLIATSS 321
           VT   F GD   Y ++A GT L   +S
Sbjct: 309 VTRATFAGDILEYEVEAAGTLLKTEAS 335