Pairwise Alignments

Query, 343 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

 Score =  239 bits (610), Expect = 8e-68
 Identities = 135/347 (38%), Positives = 215/347 (61%), Gaps = 13/347 (3%)

Query: 5   LLIENLTCQYDAQTVLKSLSLQVNPGEIVCLLGASGCGKTTLLKAIAGLLPLASGQLSLN 64
           L + N+  QY A  V+  LSLQ+  GE+V LLG SGCGKTT L+ IAG + L+ G ++++
Sbjct: 4   LELNNVRKQYGALAVVDDLSLQLRKGELVTLLGPSGCGKTTTLRMIAGFIELSGGSIAVD 63

Query: 65  CVTLDDGKRWLPPEQRNIGMIFQDYALFPHLTVAQNVGFGLDA--MPAKQKEAKIAEMLA 122
              +    R +PPE R + MIFQ YA++P++TVA+NV FGL+   +P ++ + ++ EML 
Sbjct: 64  GRQISGAGRTVPPEHRGMSMIFQSYAIWPNMTVAENVAFGLNVRRVPGEESKRRVEEMLD 123

Query: 123 LVHLDAFAERYPHQLSGGQQQRVAIARALAYKPDLLLLDEPFSNIDTQVRHELIIEIRKI 182
           +V L A A+RYP +LSGGQQQRVA+ARA+  +P++LLLDEP SN+D  +R E+  EIR++
Sbjct: 124 VVKLGALAQRYPAELSGGQQQRVALARAMVVRPEVLLLDEPLSNLDANLREEMAGEIRRL 183

Query: 183 FKQQGVTAIFVTHSREEAFAFADKMAVMNRGVIEQYGTAAELYYQPSSQFVADFLGGGSY 242
             +   T ++VTH + EA   +D++AV+N G +EQ  T   LY +P ++FVA F+G  + 
Sbjct: 184 HDEFNFTTVYVTHDQTEAMTISDRIAVLNLGKLEQIDTPWNLYNRPRTRFVAGFIGQTNL 243

Query: 243 LSAK-RISETQYQTALGVVEAIARQPIAVEAECKLLLRPQQVQIRAEEE-----SSVTVT 296
           +    R  + + +   GV+  +  Q  A  A+ ++ +RPQ + +  +        +V+V 
Sbjct: 244 VEGHVRDGQIRLRGLEGVL-PMGGQAAAASADMRISIRPQSLFLGPQGNGALPMGAVSVV 302

Query: 297 EQQFMGDHCRYLI--DAHGTQL--IATSSQPLELGQAVSVNIDTQGV 339
            + ++G++  YL+   A G +L   A  S  L++G    ++ID  GV
Sbjct: 303 ARTYLGEYWDYLVRPTAGGDELKVHAPPSSVLDVGHESLLSIDPAGV 349