Pairwise Alignments

Query, 343 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., ATP-binding component of putrescine transport system (VIMSS) from Escherichia coli BW25113

 Score =  224 bits (571), Expect = 3e-63
 Identities = 129/334 (38%), Positives = 196/334 (58%), Gaps = 22/334 (6%)

Query: 5   LLIENLTCQYDAQTVLKSLSLQVNPGEIVCLLGASGCGKTTLLKAIAGLLPLASGQLSLN 64
           L I NLT  YD Q  +  +SL +  GEI  LLGASGCGK+TLL+ +AG    ++GQ+ L+
Sbjct: 20  LEIRNLTKSYDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLD 79

Query: 65  CVTLDDGKRWLPPEQRNIGMIFQDYALFPHLTVAQNVGFGL--DAMPAKQKEAKIAEMLA 122
            V L      +PP  R I M+FQ YALFPH+TV QN+ FGL  D +P  +  +++ EML 
Sbjct: 80  GVDLSQ----VPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLG 135

Query: 123 LVHLDAFAERYPHQLSGGQQQRVAIARALAYKPDLLLLDEPFSNIDTQVRHELIIEIRKI 182
           LVH+  FA+R PHQLSGGQ+QRVA+AR+LA +P LLLLDEP   +D ++R  + +E+  I
Sbjct: 136 LVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDI 195

Query: 183 FKQQGVTAIFVTHSREEAFAFADKMAVMNRGVIEQYGTAAELYYQPSSQFVADFLGGGSY 242
            ++ GVT + VTH +EEA   A ++A+MNRG   Q G   E+Y  P++++ A+F+G  + 
Sbjct: 196 LERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNV 255

Query: 243 LSAKRISETQYQTALGVVEAIARQPIAVEAECKLL--------LRPQQVQIRAEEESS-- 292
                + + + +  L +       P+ V+A+  ++        LRP+++ +  E  ++  
Sbjct: 256 FEG--VLKERQEDGLVLDSPGLVHPLKVDADASVVDNVPVHVALRPEKIMLCEEPPANGC 313

Query: 293 ----VTVTEQQFMGDHCRYLIDAHGTQLIATSSQ 322
                 V    ++GD   Y +     Q+I+   Q
Sbjct: 314 NFAVGEVIHIAYLGDLSVYHVRLKSGQMISAQLQ 347