Pairwise Alignments

Query, 343 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., spermidine/putrescine ABC transporter ATP-binding subunit from Enterobacter asburiae PDN3

 Score =  226 bits (576), Expect = 7e-64
 Identities = 122/291 (41%), Positives = 183/291 (62%), Gaps = 16/291 (5%)

Query: 5   LLIENLTCQYDAQTVLKSLSLQVNPGEIVCLLGASGCGKTTLLKAIAGLLPLASGQLSLN 64
           L I NLT  +D Q  +  +SL +  GEI  LLGASGCGK+TLL+ +AG     +GQ+ L+
Sbjct: 20  LEIRNLTKSFDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLD 79

Query: 65  CVTLDDGKRWLPPEQRNIGMIFQDYALFPHLTVAQNVGFGL--DAMPAKQKEAKIAEMLA 122
            V L      +PP QR I M+FQ YALFPH+TV QN+ FGL  D +P  +  A++AEML+
Sbjct: 80  GVDLSS----VPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEITARVAEMLS 135

Query: 123 LVHLDAFAERYPHQLSGGQQQRVAIARALAYKPDLLLLDEPFSNIDTQVRHELIIEIRKI 182
           LVH+  FA+R PHQLSGGQ+QRVA+AR+LA +P LLLLDEP   +D ++R  + +E+  I
Sbjct: 136 LVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDI 195

Query: 183 FKQQGVTAIFVTHSREEAFAFADKMAVMNRGVIEQYGTAAELYYQPSSQFVADFLGGGSY 242
            ++ GVT + VTH +EEA   A ++A+MNRG   Q G   E+Y  P++++ A+F+G  + 
Sbjct: 196 LERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNV 255

Query: 243 LSAKRISETQYQTALGVVEAIARQPIAVEAECKLL--------LRPQQVQI 285
                + + + +  L +     + P+ V+ +  ++        LRP+++ +
Sbjct: 256 FEG--LLKDRQEDGLVIESPGLQHPLKVDPDNSVVDNVPVYVALRPEKIML 304