Pairwise Alignments

Query, 343 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., Spermidine/putrescine import ATP-binding protein PotA from Azospirillum sp. SherDot2

 Score =  221 bits (564), Expect = 2e-62
 Identities = 132/336 (39%), Positives = 194/336 (57%), Gaps = 18/336 (5%)

Query: 7   IENLTCQYDAQTVLKSLSLQVNPGEIVCLLGASGCGKTTLLKAIAGLLPLASGQLSLNCV 66
           IE +   Y +  VLK ++L + PGE    LG SGCGKTTLL+ IAG      G++ +   
Sbjct: 21  IEGVNLSYGSNHVLKDVNLAIKPGEFFAFLGPSGCGKTTLLRLIAGFNTAQRGEVRIGGR 80

Query: 67  TLDDGKRWLPPEQRNIGMIFQDYALFPHLTVAQNVGFGLDA--MPAKQKEAKIAEMLALV 124
            +      LPP +R++GM+FQ YAL+PH+TV +NV FGL+   +P  + E ++   L LV
Sbjct: 81  DIST----LPPHRRDVGMVFQSYALWPHMTVRRNVAFGLEERRVPRAEIERRVDAALELV 136

Query: 125 HLDAFAERYPHQLSGGQQQRVAIARALAYKPDLLLLDEPFSNIDTQVRHELIIEIRKIFK 184
            L   A+R P QLSGGQQQRVA+AR +  +P +LLLDEP SN+D ++R ++  E+  + +
Sbjct: 137 GLKHLADRRPSQLSGGQQQRVALARTVVIEPKILLLDEPLSNLDAKLRVQMRQELLSLQR 196

Query: 185 QQGVTAIFVTHSREEAFAFADKMAVMNRGVIEQYGTAAELYYQPSSQFVADFLGGGSYLS 244
           + G+T IFVTH +EEA    D++AVM  G ++Q GT  +LY  P++ FVA FLG  + L 
Sbjct: 197 KLGLTTIFVTHDQEEANTICDRIAVMEDGRVQQVGTPQDLYDHPANLFVAGFLGTANVLD 256

Query: 245 AK-RISETQYQTALGV-VEAIARQPIAVEAECKLLLRPQQVQIRAEEESSV--------T 294
              R      +  +G     +A   +      KL+ RPQ + IRA+ +  V        T
Sbjct: 257 GTVRDDGAGSRAFVGTGFTPVALPAVDAGTGGKLMFRPQNLAIRADGQPPVPGHARLTGT 316

Query: 295 VTEQQFMGDHCRYLIDAHGTQLIATSSQPLELGQAV 330
           V  ++F+G   RY +D  G QL+   + P + G A+
Sbjct: 317 VRHREFLGASIRYAVDV-GGQLVQVDA-PHQAGDAL 350