Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 573 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  370 bits (950), Expect = e-107
 Identities = 217/528 (41%), Positives = 319/528 (60%), Gaps = 4/528 (0%)

Query: 10  ASSLVLTTLLVLPILAIFYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLALLFGV 69
           AS LV   +L LP+LA+   A   S +++ HL+ATV+P  +  T +L   V ++ L+  V
Sbjct: 27  ASGLVALFVL-LPLLALAGIAARGSGDMWPHLIATVLPDALAETGLLVLGVGVVTLVVAV 85

Query: 70  PSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQAG- 128
           P AWL+A C  PG   L+WAL+LPLA+P YI+ + +       GP+Q ALR   G  +  
Sbjct: 86  PCAWLVATCTFPGRSVLEWALLLPLAVPGYIVAFSYLDVLHPLGPVQEALRALLGIASPR 145

Query: 129 SYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRRISL 188
               PD+RS GG  +VL+ VLYPYVYL  RA+F+ Q+   L+ AR L  S W++F RI L
Sbjct: 146 GLRLPDVRSTGGCILVLSAVLYPYVYLSARASFVLQSAAALEVARTLGASRWRAFLRIGL 205

Query: 189 PLARPAIAVGLSLVAMETIGDFGTVSLFAVNTLTTAVYDTWLGYSNLNAAAKISAIMLVM 248
           PLARPAI  GL+LV +E +GD G      V TLT ++Y TW+  SNL  AA+I+ +ML +
Sbjct: 206 PLARPAIVAGLTLVLLEVLGDIGASEFLGVRTLTVSIYSTWVNRSNLPGAAQIALVMLAL 265

Query: 249 VLLLLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALIWCWGLVAVAFILPLLQL- 307
           VL L+  ER++RR ++   T  ++  +    L G + +AA  +C   V + F++PLL L 
Sbjct: 266 VLGLILLERWARRARRFVATG-SARPQAPLRLTGLQGFAAAAFCALPVMLGFLVPLLHLS 324

Query: 308 ISYAWTYFAQSWTTQFKEYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLS 367
           IS A       + T+    A  +  ++     +A+ + LV     RL     +    R++
Sbjct: 325 ISAARRMAETGFPTRILGEAATTAALAAGTVTLALGLGLVVALGQRLTRAPLASGFARVA 384

Query: 368 SMGYAVPGTVLAIGILVPVLALDHLINDIAKMMEWGRPGLVFSGSLFAIVFALVVRFSAV 427
           S+GYAVPGTVLA+G+L P+   D++++   K       GL+ SGS  A+V AL +RF A+
Sbjct: 385 SLGYAVPGTVLAVGLLSPLAGFDNMLDAAMKQAFGISTGLLLSGSGAALVMALAIRFLAI 444

Query: 428 AIGSIESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNA 487
            +G IE+  +K+SP LDMAAR++G    + ++RV LPL+R     A LLVF+++MKEL A
Sbjct: 445 PVGGIEAGFAKLSPHLDMAARSLGSSQPRTVRRVLLPLLRPALATAALLVFVDAMKELPA 504

Query: 488 AILLRPFNFETLATYVYNYASDERLELAALPAILLVLVGLIPLVMVNR 535
            +LLRP   ETLAT+VY  A+    E  AL A++++LVGL P++++ R
Sbjct: 505 TLLLRPLGLETLATHVYGEAARGTYEDGALAALVILLVGLGPVMLLAR 552



 Score = 41.6 bits (96), Expect = 8e-08
 Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 20/259 (7%)

Query: 289 LIWCWGLVAVAFILPLLQLISYAWTYFAQSW----TTQFKEYAINSFTVSISAAVVAVLV 344
           L+   GLVA+  +LPLL L   A       W     T   +    +  + +   VV ++V
Sbjct: 24  LLMASGLVALFVLLPLLALAGIAARGSGDMWPHLIATVLPDALAETGLLVLGVGVVTLVV 83

Query: 345 ALVANFYARLQNNRTSVALMRLSSMGYAVPGTVLAIGI------LVPVLALDHLINDIAK 398
           A+   +            L     +  AVPG ++A         L PV      +  IA 
Sbjct: 84  AVPCAWLVATCTFPGRSVLEWALLLPLAVPGYIVAFSYLDVLHPLGPVQEALRALLGIAS 143

Query: 399 MMEWGRPGLVFSGSLFAIVFALVVRFSAVAIGSIESSLSKVSPSLDMAARTMGCHANQML 458
                 P +  +G    ++ A  V +  V + +  S + + + +L++ ART+G    +  
Sbjct: 144 PRGLRLPDVRSTGGCILVLSA--VLYPYVYLSARASFVLQSAAALEV-ARTLGASRWRAF 200

Query: 459 KRVHLPLIRRGALIAGL-LVFIESMKELNAAILLRPFNFETLATYVYNYASDERLELAAL 517
            R+ LPL  R A++AGL LV +E + ++ A+  L      TL   +Y+     R  L   
Sbjct: 201 LRIGLPL-ARPAIVAGLTLVLLEVLGDIGASEFL---GVRTLTVSIYS-TWVNRSNLPGA 255

Query: 518 PAILLVLVGLI-PLVMVNR 535
             I LV++ L+  L+++ R
Sbjct: 256 AQIALVMLALVLGLILLER 274