Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 757 a.a., Ferric iron ABC transporter, permease protein from Variovorax sp. SCN45

 Score = 83.2 bits (204), Expect = 3e-20
 Identities = 107/524 (20%), Positives = 216/524 (41%), Gaps = 58/524 (11%)

Query: 51  FNTLVLTCSVLLLALLFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFD 110
           +NTLVL           G   A +       G+  L+   +LP+  P +++G      F 
Sbjct: 241 WNTLVLALLTAAGTTFLGTLMALMAERGSKRGQGALRVLALLPIITPPFVVGLGLILLFG 300

Query: 111 YAGPIQIALRDWTGWQAGSYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQ 170
            AG +   L    G +   +++     + G  V       P  +++ R        +L +
Sbjct: 301 RAGIVNQVLESVFGIEPTRWFY----GMPGVLVAQLFAFTPIAFMIMRGVVQGIAPSLEE 356

Query: 171 SARLLKCSPWQSFRRISLPLARPAIAVGLSLVAMETIGDFGTVSLFA--VNTLTTAVYDT 228
           +A++L+    ++F  I+LPL +P +A    +  +E+I DFG   +     + L+T ++  
Sbjct: 357 AAQMLRADRRRTFFTITLPLLKPGLANAFLVGFIESIADFGNPVVVGGQFSVLSTDIFFA 416

Query: 229 WLGYS-NLNAAAKISAIMLVMVLLLLSSERYSRRRQKLYQTQFNSHEE---------YRY 278
            +G   +   AA ++ ++ +  L + + +R    +Q  Y T     +           R 
Sbjct: 417 IVGAQYDQGRAASLAWVLTLFALGVFALQRGLLGKQN-YTTVSGKGDAGIAMALPDGVRR 475

Query: 279 TL----KGWRLWAALIWCWGLVAVAFILPLLQLISYAWTYFAQSWTTQFKEYAI------ 328
           T+      W  + A+++ +   A  F+    +  S+   +F  ++  ++ ++ +      
Sbjct: 476 TIYCIAMPWIAFTAVVYLFAF-AGGFVQTWGRDYSFTLNHFKSAFALEWGQFGLVWAGTA 534

Query: 329 -NSFTVS-----ISAAVVAVLVALVANFYARLQNNRTSVALMRLSS-MGYAVPGTVLAIG 381
            NS   +     ISA + A L  L+A   AR  N      L    + + +A+PGTVL + 
Sbjct: 535 WNSLITTLKLAGISAPITAALGLLIAWLLAR--NEFKGQGLFEFGALLAFAIPGTVLGVS 592

Query: 382 ILVPVLALDHLINDIAKMMEWGRPGLVFSGSLFAIVFALVVRFSAVAIGSIESSLSKVSP 441
            +                + +  P    +G+   IV   + R   V + +  ++  ++  
Sbjct: 593 YI----------------LAFNVPPFELTGTGLIIVLCFMFRNLPVGVRAGTAAFKQLDR 636

Query: 442 SLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNAAILLRPFNFETLAT 501
           SLD A+  +    +Q L +V LPL++   + A +  F+ +M  ++A I L     E   T
Sbjct: 637 SLDEASLMLRASTSQTLFKVVLPLLKPALVAALVYSFVRAMTTVSAVIFLVTAENELATT 696

Query: 502 YVYNYASDERLELA-ALPAILLVL----VGLIPLVMVNRSLEQK 540
           Y+     +    +A A   +L++L    + L+  V+  R L ++
Sbjct: 697 YIIGRVGNGDYGIALAYCTVLMILMSLAIALVQFVVGERKLGRR 740



 Score = 40.0 bits (92), Expect = 3e-07
 Identities = 47/244 (19%), Positives = 95/244 (38%), Gaps = 26/244 (10%)

Query: 27  FYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLALLFGVPSAWLIAMCKLPGERWL 86
           F +AF      F  + A      +  TL L      +    G+  AWL+A  +  G+   
Sbjct: 515 FKSAFALEWGQFGLVWAGTAWNSLITTLKLAGISAPITAALGLLIAWLLARNEFKGQGLF 574

Query: 87  QWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQAGSYWFPDIRSLGGASVVLA 146
           ++  +L  A+P  ++G  +   F+                      P     G   +++ 
Sbjct: 575 EFGALLAFAIPGTVLGVSYILAFN---------------------VPPFELTGTGLIIVL 613

Query: 147 LVLY---PYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRRISLPLARPAIAVGL--SL 201
             ++   P       AAF + + +L +++ +L+ S  Q+  ++ LPL +PA+   L  S 
Sbjct: 614 CFMFRNLPVGVRAGTAAFKQLDRSLDEASLMLRASTSQTLFKVVLPLLKPALVAALVYSF 673

Query: 202 VAMETIGDFGTVSLFAVNTLTTAVYDTWLGYSNLNAAAKISAIMLVMVLLLLSSERYSRR 261
           V   T        + A N L T      +G  +   A     ++++++ L ++  ++   
Sbjct: 674 VRAMTTVSAVIFLVTAENELATTYIIGRVGNGDYGIALAYCTVLMILMSLAIALVQFVVG 733

Query: 262 RQKL 265
            +KL
Sbjct: 734 ERKL 737



 Score = 30.4 bits (67), Expect = 3e-04
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 8/73 (10%)

Query: 283 WRLWAALIWCWGLVAVAFILPLLQLISYAWTYFAQSWTTQFKEYAINSFTVSISA-AVVA 341
           W L   L+   GL A  F +      +  W++ A  + TQF E A+N F +       + 
Sbjct: 103 WLLAGGLVGALGLAATGFTIG-----ARGWSFAA--FNTQFGELAVNQFGIGAGGFLALT 155

Query: 342 VLVALVANFYARL 354
            LV L+A   ARL
Sbjct: 156 ALVLLMAFGIARL 168