Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  124 bits (312), Expect = 7e-33
 Identities = 126/555 (22%), Positives = 241/555 (43%), Gaps = 57/555 (10%)

Query: 8   WKASSLVLTTLLVL--PILAIFYTAFGNSDEV--FAHLLATVMPTY----IFNTLVLTCS 59
           W   +L+L  +L++  PIL + + +F  +D    F+   A +  +     + N+  L  +
Sbjct: 15  WLFGTLILLLILLVANPILRLIWDSFHTADGTLSFSSYAAALGRSRNLQALLNSFYLGVA 74

Query: 60  VLLLALLFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIAL 119
           V  +A+  GVP A  ++   +P   +   +++    MP ++       W   AGP    L
Sbjct: 75  VTAIAIALGVPLALAVSRTNMPARGFTHVSVLAAFVMPNFLGAIA---WILLAGPNAGWL 131

Query: 120 -RDWT---GWQAGSYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLL 175
            R W+   G   G +   +I S  G + V+AL  YP +Y+  ++A    +  L  +A + 
Sbjct: 132 NRLWSEVLGTDRGPF---NIFSFWGLAFVIALYTYPLIYVFTKSALDLVSTELEDAASIH 188

Query: 176 KCSPWQSFRRISLPLARPAIAVGLSLVAMETIGDFGTVSLFAV----NTLTTAVYDTWLG 231
                ++  R++LPL  P+I     L+ +E++  +GT +L A+    N  TT +   +  
Sbjct: 189 GAGKLRTLTRVTLPLVLPSIVGAAILIFLESVALYGTPALIAIPAGLNLATTQIVSFFEY 248

Query: 232 YSNLNAAAKISAIMLVMVLLLLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALIW 291
              +  AA  S  +L + +++L  +R    R+          E   + +  W+ W  L +
Sbjct: 249 PLKVEQAAAFSMPILALTVVMLYLQRRLLARKGFVSVSGKGGERRPFDVGAWK-WVLLGY 307

Query: 292 CWGLVAVAFILPLLQLI----SYAW--------TYFAQSWTTQFKEYAI-----NSFTVS 334
              +  +  ++PL+ L+    S AW          FA  +   F++  +     N+ T S
Sbjct: 308 SALVSLLTVVMPLIILVLASLSKAWGRGFSAGNLTFANFYNIFFEQLTVRSALVNTVTYS 367

Query: 335 ISAAVVAVLVALVANFYARLQNNRTSVALMRLSSMGYAVPGTVLAIGILVPVLALDHLIN 394
              A+V V + +   +  + +       +  L+    AVPG +LAIG+            
Sbjct: 368 AVTALVCVAMGMCVAYATQRRITPFPTLIQFLALAPVAVPGLILAIGLYAA--------- 418

Query: 395 DIAKMMEWGRPGLVFSGSLFAIVFALVVRFSAVAIGSIESSLSKVSPSLDMAARTMGCHA 454
                  +  P     G+   +V A   RF  +A+ +  + +  ++P L+ A R +G   
Sbjct: 419 -------YAGPPFSLYGTGALVVVAFTTRFLPIAVTACGAGVRSLNPELEEAVRILGGGR 471

Query: 455 NQMLKRVHLPLIRRGALIAGLLVFIESMKELNAAILLRPFNFETLATYVYNYASDERLE- 513
              L +V +PL+ +  + A +LVF+   KEL+ A+ L       ++    + +     E 
Sbjct: 472 LTALGKVVVPLLNKTLVGAFILVFVICTKELSTAVFLTGPASRVVSVLTLDLSEQGNYES 531

Query: 514 LAALPAILLVLVGLI 528
           LAA+  +L+V+V L+
Sbjct: 532 LAAMGVVLVVIVTLV 546