Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., putative Iron ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  374 bits (959), Expect = e-108
 Identities = 209/532 (39%), Positives = 329/532 (61%), Gaps = 11/532 (2%)

Query: 8   WKASSLVLTTLLVLPILAIFYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLALLF 67
           W     ++  L++LP+  +  +      ++++HLL T M   + NTL L   V +   + 
Sbjct: 9   WYLPVSLIAALVLLPLSVLLLSWQSIDLQIWSHLLDTQMGRLLGNTLTLVVGVGIGVTVL 68

Query: 68  GVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQA 127
           GV  AWL ++C  PG RWL WAL+LP A+PAY++ ++F    D+AGP+Q ALR+      
Sbjct: 69  GVSLAWLTSLCDFPGRRWLDWALMLPFAIPAYVLAFVFVGLLDFAGPVQSALRE----VF 124

Query: 128 GSYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRRIS 187
           G    P +RS GG   VL LV YPYVYLL R AF+ Q   L+++AR+L  SP Q+F R++
Sbjct: 125 GPMRLPRVRSTGGVITVLVLVFYPYVYLLARTAFLAQGKGLMEAARVLGLSPLQAFWRVA 184

Query: 188 LPLARPAIAVGLSLVAMETIGDFGTVSLFAVNTLTTAVYDTWLGYSNLNAAAKISAIMLV 247
           LP+ARPAI  G++L  MET+ DFG V++F  +T TTA+Y TW G+ +L++AA++++++L+
Sbjct: 185 LPMARPAIGAGIALALMETLADFGAVAVFNFDTFTTAIYKTWYGFFSLSSAAQLASLLLL 244

Query: 248 MVLLLLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALIWCWGLVAVAFILPLLQL 307
            V+L+L  ER +R   +          +  Y L+G +   A  WC  + A AF++PLLQL
Sbjct: 245 AVMLVLYGERRARGASR--SGNERPRAQALYHLRGLKALLASGWCLLVFACAFVIPLLQL 302

Query: 308 ISYAWTYFAQSWTTQFKEYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLS 367
           +++ W         ++    +++  +   AA+V V VAL+  F  R        A + L+
Sbjct: 303 LAWFWQRGRHDLDERYIGLVLHTLYLGSMAALVTVCVALLLAFARRQAPTGGIRAGVGLA 362

Query: 368 SMGYAVPGTVLAIGILVPVLALD-HLINDIAKMMEW-GRPGLVFSGSLFAIVFALVVRFS 425
           ++GYA+PG+VLA+ I++    LD HL+  ++  +   G+P L+  GSL A++ A +VRF 
Sbjct: 363 NLGYALPGSVLAVSIMLAFSYLDNHLVIPLSSWLGGAGKPLLL--GSLSALLLAYLVRFI 420

Query: 426 AVAIGSIESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKEL 485
           AVA G +ESSL ++ PSL  A+R++G    ++  +V+LPL+  GAL A LLVF++ +KE+
Sbjct: 421 AVAYGPLESSLERIRPSLPEASRSLGVGGARLFFKVYLPLLVPGALGAALLVFVDVLKEM 480

Query: 486 NAAILLRPFNFETLATYVYNYASDERLELAALPAILLVLVGLIPLV-MVNRS 536
            A +L+RPF ++TLA  V+   S+     A+LPA+ LVLVGL+P++ ++ RS
Sbjct: 481 PATLLMRPFGWDTLAVRVFEMTSEGEWARASLPALTLVLVGLLPVIGLIRRS 532