Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 522 a.a., iron ABC transporter permease from Pseudomonas sp. SVBP6

 Score =  187 bits (474), Expect = 1e-51
 Identities = 159/533 (29%), Positives = 257/533 (48%), Gaps = 56/533 (10%)

Query: 13  LVLTTLLV--LPILAIFYTAFGNSDEVFAHLLATVMPTYIF----NTLVLTCSVLLLALL 66
           +VL  LL+  L +L + Y A    +  +   L  +   +++    NTL+L   V L  + 
Sbjct: 25  VVLPVLLLVGLSLLPLLYVALKTWEAGWREALHLLWRPFVWGLLRNTLMLMAGVTLACMA 84

Query: 67  FGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQ 126
            GV  AWL+    LPG R     L LP A+PA++ G+                     W 
Sbjct: 85  LGVSLAWLLERSDLPGRRLWGVILCLPFAVPAFVSGFT--------------------WV 124

Query: 127 AGSYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRRI 186
           + S   P    LGGA +V++L  YP V+L   A     + +L +SAR L  + W  F RI
Sbjct: 125 SLS---PRFEGLGGAILVMSLSKYPLVFLPVAATLRNLDTSLEESARTLGQTRWGVFFRI 181

Query: 187 SLPLARPAIAVGLSLVAMETIGDFGTVSLFAVNTLTTAVYDTW-LGYSNLNAAAKISAIM 245
           +LPL  P+I  G  L+A+  + +FG +S+  + T T+A+Y  + L +SN NAA  +SA++
Sbjct: 182 TLPLLWPSIIGGSLLIALHMLVEFGALSILGLQTFTSAIYQQFELEFSNANAAM-LSAVL 240

Query: 246 LVMVLLLLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAAL--IWCWGLVAVAFILP 303
           L M LL+L  E   R R K    +       R      R W  +  ++C  L  +   +P
Sbjct: 241 LFMCLLMLWLEL--RVRGKARHVRIGQGVARRGAPIHLRAWMPVGQLYCLTLALLGSGIP 298

Query: 304 LLQLISYAWTYFAQSWTTQFKEYA---INSFTVSISAAVVAVLVALVANFYARLQNNRTS 360
           L  ++ Y W     S      + +    +S ++S+  A +++L+AL  +F       R +
Sbjct: 299 L-GMLGY-WLSVGSSAAFPLADISRALFSSLSLSLGGAGLSLLLALPVSFLVVRYKGRLA 356

Query: 361 VALMRLSSMGYAVPGTVLAIGILVPVLALDHLINDIAKMMEWGRPGLVFSGSLFAIVFAL 420
           +   RL  + +A+PG V+A+ ++   L   H +           P L  +  L  + +AL
Sbjct: 357 IWAERLPYLLHALPGLVIALTLVYFAL---HYV-----------PALYQTTGLLLLAYAL 402

Query: 421 VVRFSAVAIGSIESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIE 480
           +  F  +A   + ++L+K +P L+ AART+G        RV LP+I      A  LVF++
Sbjct: 403 L--FLPLAQAPVRTALNKAAPQLEEAARTLGATQFTAFCRVTLPIIFPALAAAFALVFLD 460

Query: 481 SMKELNAAILLRPFNFETLATYVYNYASDERLELAALPAILLVLVGLIPLVMV 533
           +MKEL A +LL P    TLAT V+ + ++     AA  A LL+LV  +P+ ++
Sbjct: 461 AMKELTATLLLSPTGMTTLATEVWAHTANVEFAAAAPYAALLILVSGLPVYLL 513