Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Ferric iron ABC transporter, permease protein from Pseudomonas sp. S08-1

 Score =  394 bits (1012), Expect = e-114
 Identities = 214/537 (39%), Positives = 332/537 (61%), Gaps = 14/537 (2%)

Query: 8   WKASSLVLTTLLVLPILAIFYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLALLF 67
           W   +  +  L++LP+  +  +      E+++HL  T MP  + NTLVL   V +   L 
Sbjct: 9   WYPIAFAIAALVLLPLSVLVLSWHEVDGEIWSHLWDTQMPRLLGNTLVLVFGVGVGVTLL 68

Query: 68  GVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQA 127
           GV  AWL ++C+ PG RWL WAL+LP A+PAY++ ++F   FD++GP+Q  LR+W G   
Sbjct: 69  GVSLAWLTSLCEFPGRRWLDWALMLPFAIPAYVLAFVFIGLFDFSGPVQSLLREWFGT-- 126

Query: 128 GSYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRRIS 187
                P +RS GG   VL LV YPYVYLL R+AF+ Q   LL++AR+L  SPWQ+F R++
Sbjct: 127 -GIRLPRVRSTGGVISVLVLVFYPYVYLLARSAFLAQGRGLLEAARVLGQSPWQAFWRVA 185

Query: 188 LPLARPAIAVGLSLVAMETIGDFGTVSLFAVNTLTTAVYDTWLGYSNLNAAAKISAIMLV 247
           LP+A PAI  GL+L  MET+ DFG V++F  +T TTA+Y TW G+ +L++A ++++++L+
Sbjct: 186 LPMAWPAIGAGLALAIMETLADFGAVAVFNFDTFTTAIYKTWYGFYSLSSATQLASLLLL 245

Query: 248 MVLLLLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALIWCWGLVAVAFILPLLQL 307
            V+L+L  ER +R   +    +      YR  L GW+  AA  WC  +   AF++PLLQL
Sbjct: 246 AVMLVLYGERRARGASRPASERPRGKALYR--LHGWKALAASAWCGLVFVCAFVVPLLQL 303

Query: 308 ISYAWTYFAQSWTTQFKEYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLS 367
           + + W         ++    +++ ++   AA++ V VAL+  F  R    R   + + L+
Sbjct: 304 LVWFWQRGRFDLDERYAGLILHTLSLGGLAALITVAVALLLAFARRQAPTRPIRSAVSLA 363

Query: 368 SMGYAVPGTVLAIGILVPVLALDHLINDIAKMMEW----GRPGLVFSGSLFAIVFALVVR 423
           ++GYA+PG+VLA+ I++    LD  +  +  +  W    G+P L+  GSL A++ A +VR
Sbjct: 364 NLGYALPGSVLAVSIMLAFSFLDREL--VIPLSTWLGGAGKPLLL--GSLAALLLAYLVR 419

Query: 424 FSAVAIGSIESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMK 483
           F AVA G +ES L+++ PSL  AAR++G     +  RV+LPL+  GAL A LLVF++ +K
Sbjct: 420 FMAVAYGPLESGLARIRPSLPQAARSLGVGGPALFLRVYLPLLVPGALSAALLVFVDVLK 479

Query: 484 ELNAAILLRPFNFETLATYVYNYASDERLELAALPAILLVLVGLIPLV-MVNRSLEQ 539
           E+ A +L+RPF ++TL+  ++   S+     AALPA+ LVLVGL+P++ ++ RS  Q
Sbjct: 480 EMPATLLMRPFGWDTLSVRIFEMTSEGEWARAALPALTLVLVGLLPVIGLIRRSARQ 536