Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 729 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  115 bits (288), Expect = 6e-30
 Identities = 109/521 (20%), Positives = 211/521 (40%), Gaps = 50/521 (9%)

Query: 50  IFNTLVLTCSVLLLALLFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWF 109
           ++N++ L     +   L G+  A +        ++ L+   VLP+  P ++I       F
Sbjct: 217 VWNSVFLAVMTGIATTLLGLAFALVAVRTGFRAKKLLRVLTVLPIITPPFVISLAVILLF 276

Query: 110 DYAGPIQIALRDWTGWQAGSYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLL 169
              G + + L DW G    S W   I  L G  +   L   P  +L+          +L 
Sbjct: 277 GRNGTVTLVLADWFGIPV-SRW---IYGLPGVLLTQTLAFTPISFLVMIGVVQGIGPSLE 332

Query: 170 QSARLLKCSPWQSFRRISLPLARPAIAVGLSLVAMETIGDFGTVSLFAVN--TLTTAVYD 227
           ++A+ L+ S W +FR ++ PL RP +A    +  +E++ DFG   +   N   L+T +Y 
Sbjct: 333 EAAQTLRASRWVTFRTVTWPLMRPGVANAFLISFIESLADFGNPLILGGNFEVLSTKIYF 392

Query: 228 TWLGYSNLNAAAKISAIMLVMVLLLLSSERYSRRRQKLYQTQFNSHEE------------ 275
             +G  N    A    I+L+ + L     +     +K Y T     +             
Sbjct: 393 AVVGAQNDPGRAAALGIILLFMCLGAFWVQRQWLGKKSYATVGGKGDNGIPSQLPRGIKI 452

Query: 276 -----------YRYTLKGWRLWAALIWCWGLVAVAFILPLLQLISYAWTYFAQSWTTQFK 324
                      + + L G  L+      WG      +   L     +W      W+ +  
Sbjct: 453 AAYATALPWAAFTFVLYGLILFGGFTENWGRNNSLTLRHYLAAFDLSWGPGGLIWSGRAW 512

Query: 325 EYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLSSMGYAVPGTVLAIGILV 384
                +  V+  +A +   V L+  +    Q  +   A   L+ + +A+PGTV+ I  + 
Sbjct: 513 GSLFTTIEVAALSAPLTAAVGLLTAYLLVRQRFKGQGAFEFLTMLSFAIPGTVIGISYI- 571

Query: 385 PVLALDHLINDIAKMMEWGRPGLVFSGSLFAIVFALVVRFSAVAIGSIESSLSKVSPSLD 444
                          + + +P +  +G++  ++   V R   V+I +  +++S++  SLD
Sbjct: 572 ---------------LAFNQPPIELTGTVTILIVCFVFRNMPVSIRAGVAAMSQIDRSLD 616

Query: 445 MAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNAAILLRPFNFETLATYVY 504
             + T+G  + Q ++RV LPL+R   + + +  F+ ++  ++A I L    +E    Y+ 
Sbjct: 617 ECSLTLGAGSVQTIRRVILPLLRPAIVASLVYSFVRAITSISAVIFLVSPKYELATAYIV 676

Query: 505 NYASDERLELA-----ALPAILLVLVGLIPLVMVNRSLEQK 540
                    LA     AL  ++ V++ LI L++  R + ++
Sbjct: 677 GRVEQGDFGLAIAYSSALIVLMSVVIALIQLLVGERRIGRR 717