Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 588 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  125 bits (313), Expect = 6e-33
 Identities = 122/512 (23%), Positives = 206/512 (40%), Gaps = 45/512 (8%)

Query: 50  IFNTLVLTCSVLLLALLFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWF 109
           + N+L+L  +  L+A+  GVP AWL++   LP  R ++   +     P++I     T W 
Sbjct: 77  LVNSLILAAATALIAVGIGVPLAWLVSRTDLPFRRTIRVLTLTAFVTPSFIGA---TGWI 133

Query: 110 DYAGPIQIALRDWTGWQAGSYWFP--DIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVT 167
             A P    L     W AG       +I S+ GA  V  +   PY + +  +A  E  V 
Sbjct: 134 LLAAPNSGWLNTAWRWLAGEGAGAPLNIYSMAGAIFVCGIYTVPYSFTMVSSALDEMAVE 193

Query: 168 LLQSARLLKCSPWQSFRRISLPLARPAIAVGLSLVAMETIGDFGTVSLFAVNTLTTAVYD 227
           L  +A  L C   ++   I++PLA PA+     L  ++ +  FG  +     T    V  
Sbjct: 194 LEDAATTLGCGVLRTMVSITIPLAAPAVIASFILSFIQGLTLFGVPAFLLTPTGIPVVTT 253

Query: 228 TWLGYSNLNAAAKISAIMLVMVLLLLSSERYSRRRQKLYQTQF-----NSHEEYRYTLKG 282
               +  L       A    M LLL++   +  RR+ L + Q+      +    +  L G
Sbjct: 254 KLAEFYQLFPPEIYLAAAYCMPLLLVTGALFWMRRRYLGRKQYVTISGKTRAGRQIRLGG 313

Query: 283 WRLWAALIWCWGLVAVAFILPLLQLISYA-----------------WTYFAQSWTTQFKE 325
           WR W AL     +  V+  LP   L++ +                 W ++A    ++   
Sbjct: 314 WR-WPALFLALLVPLVSVFLPYAALLTVSLTRAWGQGLSWENLSLYWYWWAIFGNSETHT 372

Query: 326 YAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLSSMGYAVPGTVLAIGILVP 385
             +NS   S   A + V +  +  +    +    +  L  ++++   +PG VL++G    
Sbjct: 373 AIVNSLVYSTLGATLCVALGTLVAYIVERRLMVGASLLGAVATVPIVIPGIVLSVGFFAA 432

Query: 386 VLALDHLINDIAKMMEWGRPGLVFSGSLFAIVFALVVRFSAVAIGSIESSLSKVSPSLDM 445
                           + R  L   G+   ++ A    F  +A     S L  + P L+ 
Sbjct: 433 ----------------YTRAPLNLYGTPLLLIAAFAATFLPIAYSHGGSILKGIGPELER 476

Query: 446 AARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNAAILLRPFNFETLATYVYN 505
           AAR++G    +    + LPL+  G +    LVFI  ++EL+ A+ L       + T +YN
Sbjct: 477 AARSLGAGEARTFLSITLPLMGGGLVSGWFLVFIPIIRELSVAVFLITPKTNVMTTLIYN 536

Query: 506 YASDERLELAALPAILLVLVGLIPLVMVNRSL 537
                  E     ++LL+L+ L  LV V R L
Sbjct: 537 AKDGGNYEAVCAMSVLLLLITLF-LVAVARPL 567