Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 87.4 bits (215), Expect = 1e-21
 Identities = 102/507 (20%), Positives = 212/507 (41%), Gaps = 55/507 (10%)

Query: 50  IFNTLVLTCSVLLLALLFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWF 109
           ++N+ V+   +  +A+  G   A+L+A   LPG RW++  +++P+ + + ++ + F    
Sbjct: 59  LYNSCVIAFGMTAIAVPVGAMLAFLMARTDLPGRRWIEPVILVPMFVSSVVLAFGFVVSL 118

Query: 110 DYAGPIQIALRDWTGWQAGSYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLL 169
             AG + +  +   G+     W+  + S     V+  L   P+V+L   +A       + 
Sbjct: 119 GPAGFVTLWFKGVFGFVP---WY--LYSKTTLIVIAGLTHVPHVFLYTSSALRSLGSDVE 173

Query: 170 QSARLLKCSPWQSFRRISLPLARPAIAVGLSLVAMETIGDFGTVSLFA----VNTLTTAV 225
           ++AR+    P ++   +SLP+  P I     LV       FG   +      +  L T +
Sbjct: 174 EAARMTGAGPLRTALTVSLPMVMPNILYAAVLVFFLGFELFGLPLVLGDPEGILVLATYL 233

Query: 226 YDTW--LGYSNLNAAAKISAIMLVMVLLLLSSERYSRRRQKLY-QTQFNSHEEYRYTLKG 282
           Y     LG  +    A +   ++ + L L++ +R+  R    Y   +  +  +   ++  
Sbjct: 234 YKLTNKLGTPSYQLMAVVVVAIICIALPLVALQRFLLRAANRYVSVKGKAAAQKPVSIGV 293

Query: 283 WRLW--AALIWCWGLVAVAFILPLLQLISYAWTYFAQSW-----------TTQFKEYA-- 327
           WR W  AA+I  W L  V  ++P+  L+  A   F  SW              F+E    
Sbjct: 294 WR-WPAAAMITAWLLFTV--VIPISGLVLRA---FVSSWGEGVNLLDVLTLAHFRELMEF 347

Query: 328 -------INSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLSSMGYAVPGTVLAI 380
                  +N+  ++     ++V V  + N  A    +  +  +  L  +  A+PG V  +
Sbjct: 348 PNLTRGIVNTLLIASVGGALSVGVYTMLNLAAHRWQSGWTRLMDYLVLLPRAMPGLVAGL 407

Query: 381 GILVPVLALDHLINDIAKMMEWGRPGLVFSGSLFAIVFALVVRFSAVAIGSIESSLSKVS 440
            I   V      ++ + + M              AI  A  + + A  +  +  +L ++ 
Sbjct: 408 AIFW-VFLFTPFLSPLRQTM-------------IAIWVAYTLVWLAYGMRLVSGALLQIG 453

Query: 441 PSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNAAILLRPFNFETLA 500
           P L+ A R +G    ++ + + +PL++ G   + LL+F+  M+E +  + L     E + 
Sbjct: 454 PELEEAGRIVGASPGRVSRDLTIPLVKVGLFSSWLLIFVTFMREYSTGVYLLAPGTEVIG 513

Query: 501 TYVYNYASDERLEL-AALPAILLVLVG 526
           + + +      ++L  AL  + + ++G
Sbjct: 514 SLLVSLWGTGAVDLVTALSTVNIAMIG 540



 Score = 37.0 bits (84), Expect = 2e-06
 Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 434 SSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNAAILLR- 492
           S+L  +   ++ AAR  G    +    V LP++    L A +LVF    +     ++L  
Sbjct: 163 SALRSLGSDVEEAARMTGAGPLRTALTVSLPMVMPNILYAAVLVFFLGFELFGLPLVLGD 222

Query: 493 PFNFETLATYVY---NYASDERLELAALPAILLVLVGLIPLVMVNRSL 537
           P     LATY+Y   N       +L A+  + ++ + L PLV + R L
Sbjct: 223 PEGILVLATYLYKLTNKLGTPSYQLMAVVVVAIICIAL-PLVALQRFL 269