Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 725 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  111 bits (278), Expect = 8e-29
 Identities = 117/515 (22%), Positives = 216/515 (41%), Gaps = 59/515 (11%)

Query: 51  FNTLVLTCSVLLLALLFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFD 110
           +NTL L   V +L    G+  A +        +  L+ A +LP+  P ++IG      F 
Sbjct: 211 WNTLALAGVVGVLTTGTGLAFALIAVRTGFRFKAALRLASILPVITPPFVIGLAIILLFG 270

Query: 111 YAGPIQIALRDWTGWQAGSYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQ 170
            AG +   L         S W   I  + G ++   L   P  +L+        + TL +
Sbjct: 271 RAGVVTDLLSTLFDIPR-SRW---IYGMPGVAMAQILAFTPISFLVLVGVLQGVSPTLEE 326

Query: 171 SARLLKCSPWQSFRRISLPLARPAIAVGLSLVAMETIGDFGTVSLFAVN--TLTTAVYDT 228
           +++ L+ +PW +FR ++LPL RP +A    +  +E++ DFG   +   N   L+T ++  
Sbjct: 327 ASQTLRATPWITFRTVTLPLIRPGLANAFLISFIESLADFGNPLVLGGNFDVLSTKIFYA 386

Query: 229 WLGYSNLNAAAKISAIMLVMVLL--LLSSERYSRRRQKLYQTQFNSHEE---------YR 277
            +G ++    A + AI+L+   L   L+  R+  RR   Y T     +           R
Sbjct: 387 VVGAAHDQGRAAVLAIILLSFTLSAFLAQRRWLGRRS--YATVAGKGDAGLPSPLPSGVR 444

Query: 278 YTLKG-WRLWAAL-IWCWGLVAVAFILP------LLQLISY-----------AWTYFAQS 318
                   LW  L +  +G + V   L        L LI Y            W +   +
Sbjct: 445 IAASAVAALWTGLTVLVYGTILVGGFLKSLGRDNTLTLIHYQTAFGIETGPNGWWFSGSA 504

Query: 319 WTTQFKEYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLSSMGYAVPGTVL 378
           W + F    ++   + ++AA     + L+  +    Q+     A   L+ + +A+PGTV+
Sbjct: 505 WDSLFTTLGVSLVAMPLTAA-----LGLLTAYLLVRQSFLGRGAFEFLTMLSFAIPGTVI 559

Query: 379 AIGILVPVLALDHLINDIAKMMEWGRPGLVFSGSLFAIVFALVVRFSAVAIGSIESSLSK 438
            +  +                + +  P L  +G+   ++ A V R   V I +  ++LS+
Sbjct: 560 GVSYI----------------LAFNTPPLELTGTGLILIIAFVFRNMPVGIRAGIATLSQ 603

Query: 439 VSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNAAILLRPFNFET 498
           +  SLD A+ T+G  +   L+RV LPL+R   + A +  F+ ++  ++A I L    +  
Sbjct: 604 IDKSLDEASLTLGARSFTTLRRVILPLLRPAIVTAMVYSFVRAITSVSAVIFLVTAKYNL 663

Query: 499 LATYVYNYASDERLELAALPAILLVLVGLIPLVMV 533
              Y+   A      LA   + +L+ + ++ L+ +
Sbjct: 664 ATAYIVGRAEVGEYGLAIAYSSVLIAIMVVALLAI 698



 Score = 38.1 bits (87), Expect = 1e-06
 Identities = 48/229 (20%), Positives = 89/229 (38%), Gaps = 35/229 (15%)

Query: 50  IFNTLVLTCSVLLLALLFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWF 109
           +F TL ++   + L    G+ +A+L+      G    ++  +L  A+P  +IG  +   F
Sbjct: 508 LFTTLGVSLVAMPLTAALGLLTAYLLVRQSFLGRGAFEFLTMLSFAIPGTVIGVSYILAF 567

Query: 110 DYAGPIQIALRDWTGWQAGSYWFPDIRSLGGASVVLALVL--YPYVYLLCRAAFMEQNVT 167
           +   P+++     TG               G  +++A V    P       A   + + +
Sbjct: 568 N-TPPLEL-----TG--------------TGLILIIAFVFRNMPVGIRAGIATLSQIDKS 607

Query: 168 LLQSARLLKCSPWQSFRRISLPLARPAIAVGL-----------SLVAMETIGDFGTVSLF 216
           L +++  L    + + RR+ LPL RPAI   +           S V       +   + +
Sbjct: 608 LDEASLTLGARSFTTLRRVILPLLRPAIVTAMVYSFVRAITSVSAVIFLVTAKYNLATAY 667

Query: 217 AVNTLTTAVYDTWLGYSNLNAAAKISAIMLVMVLLLLSSERYSRRRQKL 265
            V       Y   + YS++  A  I  + L+ + LL+   R  RR   L
Sbjct: 668 IVGRAEVGEYGLAIAYSSVLIA--IMVVALLAIQLLVGERRLGRRTAAL 714