Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 557 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  407 bits (1045), Expect = e-118
 Identities = 219/530 (41%), Positives = 332/530 (62%), Gaps = 16/530 (3%)

Query: 12  SLVLTTLLVLPILAIFYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLALLFGVPS 71
           +L+L  L+ LPILA+F  + G S +++ H+  TV+P YI NT++L   V ++ L+ GV  
Sbjct: 31  ALILALLIALPILAVFVQSAGVSTDLWGHMARTVLPGYILNTVILLGIVGVVTLVTGVAC 90

Query: 72  AWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQAGSYW 131
           AW + M    G   LQW L+LPLAMPAY++ Y +T +  +AGP+Q  LR   GW+ G YW
Sbjct: 91  AWTVTMHDFRGRGVLQWLLLLPLAMPAYVLAYTYTDFLQFAGPLQSFLRTTFGWRRGDYW 150

Query: 132 FPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRRISLPLA 191
           FPDI +  GA +VL+ VLYPYVY+L RAAF+EQ+V +L+++R L CS + +FRR++LPLA
Sbjct: 151 FPDIHTAWGAGLVLSSVLYPYVYVLTRAAFLEQSVCVLEASRTLGCSAFGAFRRVALPLA 210

Query: 192 RPAIAVGLSLVAMETIGDFGTVSLFAVNTLTTAVYDTWLGYSNLNAAAKISAIMLVMVLL 251
           RPA+  G+    MET+ DFG V  F ++T T  +Y TW    +  AAA+++A++L++VL 
Sbjct: 211 RPALVAGVGYALMETLADFGAVRYFGIDTFTVGIYRTWFALGDPAAAAQLAAVLLLVVLA 270

Query: 252 LLSSERYSRRRQKLYQT--QFNSHEEYRYTLKGWRLWAALIWCWGLVAVAFILPLLQLIS 309
           L+  ER SR + + +QT  ++ +    R + +G  +  A I C   V   F+LP   LI 
Sbjct: 271 LVGLERLSRGKMRFHQTTGRYRALPAPRLSARGTVI--AWIVCLTPVLFGFLLPGAVLIR 328

Query: 310 YAWTYFAQSWTTQFKEYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLSSM 369
                  +    +F +  +N+F +  S AV+ V VAL+     R   +  +    RL+S+
Sbjct: 329 MILRGGTELTLARFTDLTVNTFILGASGAVLVVAVALMVIHGVRHDRSGFATGAARLASL 388

Query: 370 GYAVPGTVLAIGILVPVLALDHLINDIAKMMEW-GRP-GLVFSGSLFAIVFALVVRFSAV 427
           GYA PGTV+A+GIL+ V              +W G P G +   ++  I++  ++RF  V
Sbjct: 389 GYATPGTVIAVGILITV----------GLTRDWTGWPMGAILGTTIAGILYGYLIRFFVV 438

Query: 428 AIGSIESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNA 487
           A G +ES  +K+ P+L+ AAR++G    Q+L+RVHLPL+R   L A +LVF++  KEL A
Sbjct: 439 AYGPLESGFAKIGPNLEGAARSLGHTPLQVLRRVHLPLLRPSLLSAAMLVFVDITKELPA 498

Query: 488 AILLRPFNFETLATYVYNYASDERLELAALPAILLVLVGLIPLVMVNRSL 537
            ++LRPFNF+TLA   +  AS ERL+ AALPA+++VLVGL P++ ++R++
Sbjct: 499 TMILRPFNFDTLAIEAFRMASTERLDDAALPALVIVLVGLAPVIYLSRTI 548