Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., Spermidine/putrescine transport system permease protein PotB from Alteromonas macleodii MIT1002

 Score =  187 bits (476), Expect = 6e-52
 Identities = 147/522 (28%), Positives = 251/522 (48%), Gaps = 43/522 (8%)

Query: 12  SLVLTTLLVLPILAIFYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLALLFGVPS 71
           +L++  + +LP+  +F  A  ++     H L  +      NT+ L    ++ ++L GVP 
Sbjct: 11  ALLIALMALLPVGVLFSLAQDSAQLFDTHNLRVLA-----NTVSLVVLTIIGSVLIGVPL 65

Query: 72  AWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQAGSYW 131
           A+L A  ++P +R+    L  PLA+P+YI  +     F   G I+  L   T        
Sbjct: 66  AFLTAYVQMPFKRFWLILLAAPLALPSYIGAFAMYFSFGTGGEIENVLGIST-------- 117

Query: 132 FPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRRISLPLA 191
            P I  L G+++V++L  YP+V +  R++ +  + +L+ +AR L  +   S  R+ LP  
Sbjct: 118 -PPISGLWGSALVMSLYTYPFVMMTTRSSLLSLDASLVNAARTLGLTLGASLWRVVLPRV 176

Query: 192 RPAIAVGLSLVAMETIGDFGTVSLFAVNTLTTAVYDTWLGYSNLNAAAKISAIMLVMVLL 251
             ++A G  L A+  + DFGT ++   +T T  ++  +  +  L+ AA +S  ++V+V L
Sbjct: 177 VNSVAAGALLAALYALSDFGTPAIMGFDTFTRVIFVEYNAFG-LSQAAMLSLQLMVIVGL 235

Query: 252 LLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALIWCWGLVAVAFILPLLQLISYA 311
           +L  E       ++   Q    +        W+    L+    +V +A +LPL   I   
Sbjct: 236 ILFIE------SRISGAQERPGKHLSLFPARWQRNLMLLATMPVVFMAIVLPLA--IFTL 287

Query: 312 WTYFAQSWTTQFKEYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLSSMGY 371
           W     +   +F  YA NS   S  AA+VAVL+A+     A     +    + R++  G+
Sbjct: 288 WLVREGAGGFEFS-YAWNSAHASFIAAIVAVLLAIPVAHAAIA--GKAGRFMERITYFGF 344

Query: 372 AVPGTVLAIGILVPVLALDHLINDIAKMMEWGRPGLVFSGSLFAIVFALVVRFSAVAIGS 431
            VPG V+   ++   L L  L                   +L  +V A V+RF  +A+GS
Sbjct: 345 GVPGIVMGTALVYVGLQLPALYQ-----------------TLSLLVMAYVLRFIPLAVGS 387

Query: 432 IESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNAAILL 491
           + S+   +   L  AAR +G    +   R+ LPL  RG +    LVF+E+M+EL A ++L
Sbjct: 388 VRSTAENIDSGLVKAARVLGASPREAFMRITLPLTLRGMIAGAALVFLEAMRELPATLML 447

Query: 492 RPFNFETLATYVYNYASDERLELAALPAILLVLVGLIPLVMV 533
            P  FETLATY++          AA+P +LLVL+  + L+++
Sbjct: 448 GPTGFETLATYMWRVYEAGYFGRAAVPGLLLVLLSGVGLILM 489