Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  156 bits (395), Expect = 2e-42
 Identities = 143/560 (25%), Positives = 252/560 (45%), Gaps = 64/560 (11%)

Query: 13  LVLTTLLVLPILAIFYTAF----------GNSDEVFAHLLATVMPTYIFNTLVLTCSVLL 62
           ++L   L+LPI ++F+ +F           N  EVF     TV    ++NTLV+    +L
Sbjct: 30  ILLAIFLILPIFSVFFISFFDAKTGAFGFSNYAEVFTRRFYTVA---LWNTLVIGVLGML 86

Query: 63  LALLFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDW 122
            A L G+P A+  +  ++ G  ++    VL L  P +I  Y +   F   G +   L   
Sbjct: 87  GACLLGIPLAFCTSRYRIKGRTFIATFAVLVLCAPPFIGAYAWIMLFGANGAVTNLL--- 143

Query: 123 TGWQAGSYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQS 182
                     P I  + G  +V +L  +PY+YL+   A    N +   +A  L C+ +Q 
Sbjct: 144 ---SFAGISLPTIYGIPGIVMVFSLKFFPYIYLMTENALNTINKSYEDAAENLGCTAFQR 200

Query: 183 FRRISLPLARPAIAVGLSLVAMETIGDFGTVSLF--AVNTLTTAVYDTWLGYSNLNAAAK 240
           FR+I+LPL  PA++ G  +  + +I DFGT ++    + TL+T  Y     Y++  A   
Sbjct: 201 FRKITLPLVFPAVSTGAIICFVLSIADFGTPAILGKGIRTLSTIAY---AQYTSEMAGTP 257

Query: 241 ISAIMLVMVLLLLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALI---WCWGLVA 297
             A+ + MV++ +S      +R  L + ++ S    R   +  R   + I   +C+ +V 
Sbjct: 258 TMAVTISMVMIAISMAALLLQRHILAKRRYASSLTNRPVKQSMRPLKSFIVHGFCYLVVF 317

Query: 298 VAFILPLLQLISYAWTYFAQSWTTQF----------------KEYAINSFTVSISAAVVA 341
           +A +LP L +I   +T F  +    F                 +   NSF  +++A V+ 
Sbjct: 318 IA-MLPSLTVI---YTSFLATSGPVFTGGFGLDSYSRILRDSPQAIANSFMFALAAVVLI 373

Query: 342 VLVALVANFYARLQNNRTSVALMRLSSMGYAVPGTVLAIGILVPVLALDHLINDIAKMME 401
            +V+ + +F    ++N  S +L  L  + Y +PG V+AIG +                  
Sbjct: 374 AIVSGLLSFIVVRRDNAVSGSLDLLLMVPYLIPGVVMAIGYVT----------------T 417

Query: 402 WGRPGLVFSGSLFAIVFALVVRFSAVAIGSIESSLSKVSPSLDMAARTMGCHANQMLKRV 461
           +  P    +G+   IV  + +R     + S  S L ++ PS++ AA  +G    +    V
Sbjct: 418 FRYPPFDITGTALIIVLLVFIRRLPYGVRSTTSILRQIKPSIEEAAVNLGASPAKTFLSV 477

Query: 462 HLPLIRRGALIAGLLVFIESMKELNAAILLRPFNFETLATYVYNYASD-ERLELAALPAI 520
            +PL+  G +I  L+ FI ++ EL++ ++L      T+   +Y    D E    AAL  +
Sbjct: 478 TVPLMLPGLIIGSLMSFITAINELSSTLILYTARTITMPVLIYIQVIDGEFGTAAALSTL 537

Query: 521 LLVLVGLIPLVMVNRSLEQK 540
           LLV  G+   V+   S +++
Sbjct: 538 LLVSTGVCVFVVFRLSEDKE 557