Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  124 bits (312), Expect = 7e-33
 Identities = 129/550 (23%), Positives = 242/550 (44%), Gaps = 53/550 (9%)

Query: 14  VLTTLLVLPILAIFYTAFGNS--DEVFAHLLATVMPTYIFNTLVLTCSVLLLALLFGVPS 71
           V+  L  LP+  + YT   +S   +++  L    +     NTL  +   +L++L  G   
Sbjct: 22  VVFALSALPLGRLAYTGIVSSLNGDIWRLLADPALWDAAQNTLSTSFFGMLISLAIGGAF 81

Query: 72  AWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQAGSYW 131
           A  + +C + G+  L +  +LP+ +P  +       W    GP    L+   G       
Sbjct: 82  ALSLTLCDIRGKSILSFLFMLPMMIPPQVTAL---SWIGMTGPSSTLLKA-IGLAPAMGS 137

Query: 132 FPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRRISLPLA 191
              + S+ G +++L +   P VYL  RA  +      +++A+L   SP +    I LPL+
Sbjct: 138 PQPLYSIAGIALLLGVQHAPLVYLSLRAGLLALPQDGIEAAKLSGASPRRVLFDIILPLS 197

Query: 192 RPAIAVGLSLVAMETIGDFGTVSLFAVN----TLTTAVYDTW--LGYSNLNAAAKISA-I 244
            P +  G ++  +  +G+FG  ++  +     TL T +Y  +   G S     A +S  I
Sbjct: 198 TPGLIAGAAISFVSNVGNFGIPAILGIPGSIFTLPTLIYSRFASFGTSTFGDIAILSTMI 257

Query: 245 MLVMVLLLLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALIWCWGLVAVAFILPL 304
            ++ V  L   ER  + R   Y+    S +   + L  WR+ A L   W ++    + PL
Sbjct: 258 AIISVAGLALQERAMKGRD--YRIIGLSGKAATFGLGRWRVPAELA-LWLVLLFMLVAPL 314

Query: 305 LQLIS--------------------YAWTYFAQSWT-TQFKEYAINSFTVSISAAVVAVL 343
             L++                    Y    + QS T T F+    NS  ++ + ++  + 
Sbjct: 315 TALVASSLAPAYGVPLSLKTATLHAYEELLYRQSVTRTAFR----NSLFLATATSLCLLA 370

Query: 344 VALVANFYARLQNNRTSVALMRLSSMGYAVPGTVLAIGILVPVLALDHLINDIAKMMEWG 403
           V ++  ++     +R    L  L  + YA+PG V+++  ++   A   L+          
Sbjct: 371 VTVLTAYFLVRGKSRFMFLLSALVDIPYALPGVVISVSFVLLFAAPIPLL---------- 420

Query: 404 RPGLVFSGSLFAIVFALVVRFSAVAIGSIESSLSKVSPSLDMAARTMGCHANQMLKRVHL 463
             G+   G+++ I+ A    F AV++  + S+  +  PSL+ AAR  G    + LK + L
Sbjct: 421 --GVTLYGTIWIILLAYFSSFFAVSLKPMVSAFLQFDPSLEEAARLSGAGFWRRLKDIIL 478

Query: 464 PLIRRGALIAGLLVFIESMKELNAAILLRPFNFETLATYVYNYASDERLELAALPAILLV 523
           PL+   A  + +LVF+ +  EL  + LL     +TL   +YN       +LA+  ++L+V
Sbjct: 479 PLVGPAAGASVILVFLIACNELTVSALLWSAGTQTLGVLIYNLDDSGSFDLASALSVLVV 538

Query: 524 LVGLIPLVMV 533
           ++ +I ++++
Sbjct: 539 IMVIILMLLL 548